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Name : int (CD630_03550) Accession : YP_001086822.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : integrase Tn916-like, CTn1-Orf1 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 428851 - 430041 bp Length : 1191 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12568329, 12568327, 17650959, 11157942,11073898, 8863741; Product type e : enzyme DNA sequence : ATGTCTAATGTAAAACGAAAAGACAGTAAAAATCGCAATTTGCGTAATGGAGAGAGCCAGCGAAAAGACGGAAGATACGT TTATAAATATACCGATATATACGGAAAGCCACAATTTATCTATTCTTGGAAACTTGTACCGACAGACAAAACACCTGCTG GAAAGCGTGATGATATATCGTTGAGGGAAAAAGAAGCACAGATAAAAAAAGACCTTAATGACGGTATCGACACAGCAGGC GGTAAAATGACAGTCTGCCAGCTCTACGAAAAGAAAAACAGCCAAAGAAAGAACATTAAGAGGGCTACTGAAAAAGGACG ACAGTATCTTATGAACGCTCTGAAAAATGACCCATTGGGTATGAGGGCGATTGATACTGTGAAGCAGTCGGACGCTAAAG AATGGGCTATCAGAATGAGCGAAAAAGGATATGCCTATAAAACGATTGATAACTATAAGCGTTCCTTGAAAGCGTCATTT TATATGGCAATACAAGACGACTGTATCAGAAAGAACCCGTTTGAATTTAAGCTAAGTGATGTTTTGGAAGATGATACAGA GCAGAAAGTTATCCTTACACCAGAGCAGGAAGAACGCCTGCTTGCCTTTATGGAAAAGGATAAGATTTACAGCAAGTATT ATGATGAGGTTGTGCTTCTGCTGGAAACGGGACTTCGTATTTCTGAATTTTGCGGACTGACAACGCATATTGATATGCAG AACAGAATACTCAATATAGACCACCAGTTATTGAAAGACAGCGAAATCGGATACTATATTGAAACGCCAAAGACCAAAAA CGGAAAACGGGAACTTCCATTGACAGAACGGGCTTATCAAGCAATCCAAAGAATACTAAAGAACAGAGGAAAGGCACAAC CGCTGATTGTAGGTGGTTACAGCAATTTCCTATTCTTAAACCGTGAGGGCTTGCCTAAAGTTGCAGGAAACTATGAGGGT ATGGTGCGAGGACTGATTAAGAAGTATAACAAGTATCACACGGACAAGTTACCGAACATCACACCACATTCATTTAGACA TACTTATTGTACGAATATGGCAAACAGAGGAATGAACCCAAACACCCTGCAATATCTCATGGGACACGCTAACATAACCA TGACACTTGGTTATTACGCACACGGTACATTTCAATCTGCAAAAGCAGAACTGGAAAGACTGGCTTGTTAA Protein sequence : MSNVKRKDSKNRNLRNGESQRKDGRYVYKYTDIYGKPQFIYSWKLVPTDKTPAGKRDDISLREKEAQIKKDLNDGIDTAG GKMTVCQLYEKKNSQRKNIKRATEKGRQYLMNALKNDPLGMRAIDTVKQSDAKEWAIRMSEKGYAYKTIDNYKRSLKASF YMAIQDDCIRKNPFEFKLSDVLEDDTEQKVILTPEQEERLLAFMEKDKIYSKYYDEVVLLLETGLRISEFCGLTTHIDMQ NRILNIDHQLLKDSEIGYYIETPKTKNGKRELPLTERAYQAIQRILKNRGKAQPLIVGGYSNFLFLNREGLPKVAGNYEG MVRGLIKKYNKYHTDKLPNITPHSFRHTYCTNMANRGMNPNTLQYLMGHANITMTLGYYAHGTFQSAKAELERLAC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0917 | YP_001198283.1 | Tn916, transposase | Not tested | 89K | Protein | 5e-136 | 67 |
| SSU98_0923 | YP_001200481.1 | Tn916, transposase | Not tested | 89K | Protein | 5e-136 | 67 |
| int | YP_008394266.1 | integrase | Not tested | Not named | Protein | 2e-129 | 65 |
