Gene Information

Name : pyk (CD630_33940)
Accession : YP_001089914.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 3969026 - 3970786 bp
Length : 1761 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 16333337, 15158258, 12798932, 7559366; Product type e : enzyme

DNA sequence :
ATGTTAAATAATGTAAAGAAGACAAAAATTGTTTGTACACTAGGTCCAGCATCACAAAGTGAGGAAGTTTTAACTCAACT
TATGCAAAATGGTCTAAATGTGTGTAGATTTAACTTTTCTCACGGTTCGCATGAAGAACATAAAGAAAGAATTGATATGG
CAAAGAAAGTTAGAGAAAAATTAAATAAGCCAGTTGCTATATTATTAGATACTAAAGGTCCAGAAATTAGAACAGGTAAC
TTTGAAGACCCAGAGGTATTTTTAGAAGAAGGGCAAAAGTTCACTATAACTATGAAAGATATTATGGGGACTAAAGAAAT
GTGTACAGTAAGCTATAAAGGTCTTGCTGAAGACGTTAAATCAGGAGATTCTATACTAATAGATGATGGTTTAGTTGGCT
TAAGAGTAAAAGAAATAAATGGAGAAGATATAGTTTGTGTTGTTGAAAATTCAGGAATAGTTAAAAATCATAAAGGAGTA
AATGTACCTGGTGTTAAGATAAATTTACCAGCAATAACTCCTAAAGATATAAGTGATATAGAGTTTGGAATAAGTCAAGG
AATAGATTATATAGCTGCTTCTTTTGTAAGAAAGGCATCTGATGTACTAGCAATAAGAGAAGTATTAGAGAACAATAATG
CAACTGATATACAAATAATATCTAAAATAGAAAACCAAGAAGGTGTAGAGAACCTAGATGAAATATTAAAAGTTTCTGAT
GGTATAATGGTGGCTAGAGGTGACTTAGGTGTTGAGATACCAACTGAAGAGATGCCAATAGTTCAAAAAATGATGATAAA
AAAATGTAATGAATTAGCAAAGCCAGTTGTTACTGCCACTCAAATGCTTGATTCTATGATAAGAAATCCAAGACCAACAA
GAGCAGAAGTTACAGACGTTGCCAATGCTATATATGATGGAACAGATGCGATAATGTTATCTGGAGAAACTGCTGCTGGA
AAATATCCTGTAGAGGCAGTAAAAATGATGGCTACAATAGCAAAAAGAACAGAAGAGACTTTAGATTATGATAGATTACT
AAAGGAAAATGGTACTAACAATGTTACTGTAACAGATGCAATAAGCCATGCAACTTGTACAACAGCAGTAGATTTAAATG
CATCAGCTATAATAACATCTACTTCTTCAGGATATACTGCTAGAATGGTATCTAAATTCAGACCAAAATCTCCAATAATA
GCTACTACAAATAATGAAAAGACTATGAATAAATTAGCTCTTACATGGGGAGTATATCCAGTTAAGTCTTCTGTTGCAGG
AAATACAGATGAAGTTATAGAAAAGGCAATTGAGGCAGCTAGACAAGCTGATTATATAGATAATGGGGAATTAGTAGTTA
TAACTGCTGGAGTACCAGTAGGAGTAAGTGGAACTACTAATTTAATAAAGGTTCATGTAATAAGCGAAGAAATCGTGCAA
GGTATAGGTGTAGGTACTCAAACAGTAGAAGGTAAAGTTCGTATAATAAAGAATGGAAATGCTTGTGTAGACTTTAATGA
AGGCGACATACTTGTTTCTACTGCTACTGATGCTGAAATGAACAATTATATAGAAAAAGCAGGAGCTGTAGTAACTGAGA
ATGGTGGAATGACATCACATACAGCTATTGTAGGTATAAATTTAGATATACCAGTTATTGTGTCTGCAGCTGATATAACA
AATCTAGTAAAAGATGGAGAAGTTGTAACTGTGGATGCATCAAGAGGCGTGGTATATAGAGGTTCAACTAGAGTTTTATA
A

Protein sequence :
MLNNVKKTKIVCTLGPASQSEEVLTQLMQNGLNVCRFNFSHGSHEEHKERIDMAKKVREKLNKPVAILLDTKGPEIRTGN
FEDPEVFLEEGQKFTITMKDIMGTKEMCTVSYKGLAEDVKSGDSILIDDGLVGLRVKEINGEDIVCVVENSGIVKNHKGV
NVPGVKINLPAITPKDISDIEFGISQGIDYIAASFVRKASDVLAIREVLENNNATDIQIISKIENQEGVENLDEILKVSD
GIMVARGDLGVEIPTEEMPIVQKMMIKKCNELAKPVVTATQMLDSMIRNPRPTRAEVTDVANAIYDGTDAIMLSGETAAG
KYPVEAVKMMATIAKRTEETLDYDRLLKENGTNNVTVTDAISHATCTTAVDLNASAIITSTSSGYTARMVSKFRPKSPII
ATTNNEKTMNKLALTWGVYPVKSSVAGNTDEVIEKAIEAARQADYIDNGELVVITAGVPVGVSGTTNLIKVHVISEEIVQ
GIGVGTQTVEGKVRIIKNGNACVDFNEGDILVSTATDAEMNNYIEKAGAVVTENGGMTSHTAIVGINLDIPVIVSAADIT
NLVKDGEVVTVDASRGVVYRGSTRVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-103 51
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-103 51
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-103 51
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-103 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_001089914.1 pyruvate kinase VFG0479 Protein 4e-104 51