Gene Information

Name : CD630_33900 (CD630_33900)
Accession : YP_001089909.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : conjugative transposon protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3963236 - 3963619 bp
Length : 384 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type h : extrachromosomal origin

DNA sequence :
ATGAGATTATCAAACGGTTTTGTTATTGACAAAGAGAAAACATTTGGAGAATTAAAATTTACAGCGGTGCGTGATGTGTT
CTTGCAGAATGAGGACGGGACACCGAGTACCCAGCTTAAAAAGCGTATCTATGATTTGAAGTGCAGTCTGCATGGGGGAA
TTATCCCCGTGTCTGTACCGCCAGAAGTACCGTTAAGAGAATTTCCGTACAATGCAGTTGTGGAGCTTGTCAATCCAGTA
GCCGATACCGTATCAAGAAAGACTTATACGGGTGCAGAGGTGGACTGGTATGTAAAGGCAGAGGATATTGTGTTGAAGAA
TAAAGGCAATCAGAACGCAGGCAATCCACAGAACCATGCACCGCAGGGACAGCCGAAAAAATAA

Protein sequence :
MRLSNGFVIDKEKTFGELKFTAVRDVFLQNEDGTPSTQLKKRIYDLKCSLHGGIIPVSVPPEVPLREFPYNAVVELVNPV
ADTVSRKTYTGAEVDWYVKAEDIVLKNKGNQNAGNPQNHAPQGQPKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0932 YP_001198298.1 hypothetical protein Not tested 89K Protein 7e-31 56
SSU98_0938 YP_001200496.1 hypothetical protein Not tested 89K Protein 3e-29 53