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Name : CD630_33880 (CD630_33880) Accession : YP_001089907.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : replication initiation factor Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2946 EC number : - Position : 3960451 - 3961641 bp Length : 1191 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type pf : putative factor DNA sequence : ATGGTTCTGAATGAAGAACAATGGATAAAAGAATTACGGGAAAAACGGATTGCTTACGGTATCTCACAAGGCAGGCTGGC GGTGGCTTCTGGTATCACAAGGGAATATCTCAACAAGATAGAAAGCGGAAAAATGAAGCCGTCAAAGGAACTTCTTCATA CTCTGCATAAGGAACTGGCAAGGTTCAATCCAGAAACACCGCTTACCATGCTGTTTGATTATGTGAAAATTCGTTTTCCC ACGCTGGATATACAGCATATCATCAAAGATATATTAAAACTGAATATCAATTATATGCTCCATGAAGATTACGGACATTA CAGTTATACGGAGCATTACTCTTTAGGGGACATCTTTATTTATACTTCGGCTGATGAAGAAAAAGGTGTCCTTTTAGAGT TAAAGGGGCGTGGTTGCCGACAGTTTGAAAGTTACCTGCTGGCACAACAAAGAAGCTGGTATGACTTCCTCATGGACGCA CTCGTAGACGGTGGCGTGATGAAGCGTATCGACCTTGCTATCAACGACCATACGGGCATTTTGGATATTCCAGAGCTTGC GGAAAAATGCAGGAAACGGGAATATATCGGAAAGTCTAGAAGTTATAAGTTTTACCAGTCGGGCGAGCTTATCAAGCACA GAGAGGACGAATATATGGGACGTACCCTTTATCTTGGTTCGCTGAAATCTGATGTGTATTTCTGTATCTATGAAAAGGAC TATGAGCAGTATGTCAAGTTAGGGATACCGCTGGAAGAAGCGGACATTATCAATCGTTTTGAGATACGGCTTCGGAATGA ACGTGCCTATTATGCAGTACGGGATTTGCTGACCTATTATGACGCAGAGCAGACCGCCTTTTCTGTCATCAACCAGTATG TGCGGTTTGTTGATGAAGAACCCGACAAACGAAAAAATGACTGGAAACTCAATGACCGCTGGGCGTGGTTTATTGGAGAT AATCGGCAAAGTCTGAAACTGACGACAAAGCCAGAGCCTTATACCTTAGACCGTACATTGCGTTGGGTACAAAGGCAGGT AGCACCGACCTTGAAAATGCTGAAAAAGATTGATAAAGGAAACGGTACAGACTACATGGAAACAATCGAACAGCAGGCAA AGCTCACAGAAAAGCATGAAATGATAATCAAACAGCAGACGACCCCTGCAAAAGATTTAGTAAAAAGTTAG Protein sequence : MVLNEEQWIKELREKRIAYGISQGRLAVASGITREYLNKIESGKMKPSKELLHTLHKELARFNPETPLTMLFDYVKIRFP TLDIQHIIKDILKLNINYMLHEDYGHYSYTEHYSLGDIFIYTSADEEKGVLLELKGRGCRQFESYLLAQQRSWYDFLMDA LVDGGVMKRIDLAINDHTGILDIPELAEKCRKREYIGKSRSYKFYQSGELIKHREDEYMGRTLYLGSLKSDVYFCIYEKD YEQYVKLGIPLEEADIINRFEIRLRNERAYYAVRDLLTYYDAEQTAFSVINQYVRFVDEEPDKRKNDWKLNDRWAWFIGD NRQSLKLTTKPEPYTLDRTLRWVQRQVAPTLKMLKKIDKGNGTDYMETIEQQAKLTEKHEMIIKQQTTPAKDLVKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0930 | YP_001198296.1 | Tn916, transcriptional regulator | Not tested | 89K | Protein | 2e-131 | 63 |
| SSU98_0936 | YP_001200494.1 | Tn916, transcriptional regulator | Not tested | 89K | Protein | 2e-131 | 63 |
