Gene Information

Name : CD630_33840 (CD630_33840)
Accession : YP_001089902.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : conjugative transposon protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3957397 - 3957795 bp
Length : 399 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type h : extrachromosomal origin

DNA sequence :
TTGAAAAAGATTAAAAGCTACACGGGTATCTGGAACGTGGAAAAAGTCTTGTATGCAATCAATGACTTTAACTTGCCCTT
TCCCGTTACCTTTACACAGATTACATGGTTTGTGATTACGGAATTTATCATCATTCTGTTTGGGGATATGCCCCCACTTT
CCATGATTGAGGGAGCATTTCTCAAATACTTTGGTATTCCCGTTGCTCTCACTTGGTTTATGTCGCAGAAAACCTTTGAC
GGAAAGAAGCCGTACAGCTTTTTGAAATCACAGATAACCTATGCCCTGCGACCAAAAATCACTTATGCAGGAAAAGCCGT
AAAACTGCATAAGCAAACCTTGAATGAAACAATCACGGCAGTAAGGAGTGTGAACTATGTTCCCGATAAAATATATTGA

Protein sequence :
MKKIKSYTGIWNVEKVLYAINDFNLPFPVTFTQITWFVITEFIIILFGDMPPLSMIEGAFLKYFGIPVALTWFMSQKTFD
GKKPYSFLKSQITYALRPKITYAGKAVKLHKQTLNETITAVRSVNYVPDKIY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0933 YP_001200491.1 hypothetical protein Not tested 89K Protein 7e-43 74
SSU05_0927 YP_001198293.1 hypothetical protein Not tested 89K Protein 6e-43 74