Gene Information

Name : CD630_33790 (CD630_33790)
Accession : YP_001089899.2
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : conjugative transposon protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3950845 - 3951747 bp
Length : 903 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type h : extrachromosomal origin

DNA sequence :
ATGTTTAAGAAGAATAAGAAACAGACAGAAAATGTCAAAGAAAAAAAGGTGCGTACTGTCAAGGTAGGCACACATAAGAA
AACCGTGATTGCATTGTGGGTGGTGCTTATTGCAAGCGTGAGCTTTGGAGTATATAAGAATTTTACCGCTATTGACCAGC
ACACGACCCATGAAAAAGAAGTGATTGAGCTTCGCTTGCAGGACACCAACGGGATAGTAAATTTCGTGAAGAATTTTGCA
AAGTCCTATTACACATGGAGTAACAGCAAAGAAGCGATTGACGCAAGGACGCAGGCAATCAGCGGTTATCTGACAAAGGA
ATTGCAGGACTTGAATATGGATACCATTAGAACGGATATACCGACCAGCTCTGCCATTACAGATGTGATTGTATGGAGCA
TTGAACAGTCTGGAACGGACACTTTTTCTGCTACCTACGAAGTAGATCAGCAGATAGAAGAGGGGGAACAGACAACAGCG
GTTAAGGCAACCTATACCGTAAAAGTTCATGTGGACGCTGACGGGAATATGGTAATTATTCAGAACCCTACCCTTGCACC
AGCAATCGAGAAATCAGACTATGAACCAAAGACACCAGAAGCAGACGCAAGTGTAGACGCTGATACCATAAATGACGCTA
CTGCATTTCTGGAAACTTTCTTTAAGCTATATCCAACAGCCACAGAAAAGGAGCTTGCTTACTATGTGTCTGGAAATGTG
CTTGAGTCTATCAGCAGGGACTACCTCTATTCTGAATTGGTAAACCCTATCTTTACGGTTGATGGGGACAATGTGAAAGT
CAAGGTTGCCGTGAAATTCATTGATAATCAGACAAAGGCAACACAGGTATCGCAGTTTGAATTAGTGCTACATAAGGATA
GCAACTGGAAGATTATAGGATAA

Protein sequence :
MFKKNKKQTENVKEKKVRTVKVGTHKKTVIALWVVLIASVSFGVYKNFTAIDQHTTHEKEVIELRLQDTNGIVNFVKNFA
KSYYTWSNSKEAIDARTQAISGYLTKELQDLNMDTIRTDIPTSSAITDVIVWSIEQSGTDTFSATYEVDQQIEEGEQTTA
VKATYTVKVHVDADGNMVIIQNPTLAPAIEKSDYEPKTPEADASVDADTINDATAFLETFFKLYPTATEKELAYYVSGNV
LESISRDYLYSELVNPIFTVDGDNVKVKVAVKFIDNQTKATQVSQFELVLHKDSNWKIIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1696 YP_003446798.1 hypothetical protein Not tested The aminoglycoside resistance gene cluster Protein 1e-117 91
SSU05_0923 YP_001198289.1 Tn916 hypothetical protein Not tested 89K Protein 1e-72 52
SSU98_0929 YP_001200487.1 Tn916 hypothetical protein Not tested 89K Protein 1e-72 52