Gene Information

Name : CD630_33430 (CD630_33430)
Accession : YP_001089860.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : replication initiation factor
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2946
EC number : -
Position : 3906771 - 3907751 bp
Length : 981 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 16804543, 17658189,16788196, 12568329,12568327, 17650959, 11157942,11073898, 8863741; Product type pf : putative factor

DNA sequence : 
ATGCTCTTTGACTATGTACGGATTCGCTTCCCCACTACGGATGTGAAGCATATCGTGGAAGACGTGCTGCGGCTAAAGCT
ATCTTACTTTATCCATGAAGACTACGGATTCTACTCTTACACGGAGCATTACTATCTGGGTGATATTTTCGTTCTGGTAT
CGCCGGAACTGGAAAAAGGGGTGCTGCTGGAACTGAAAGGGCGTGGCTGCCGCCAGTTTGAAAGCTATCTTCTGGCACAG
GAACGAAGCTGGTATGAGTTTTTCATGGATGTTCTCATGGAGGACGGCGTGATGAAGCGGCTTGACCTTGCCATCAATGA
CAAAACGGGAATCCTGAACATTCCCCATCTGACAGAGAAGTGCCGGAATGAGGAATGTATCTCGGTCTTCCGCAGCTTCA
AAAGCTACCGCAGCGGCGAACTGGTACGGCGTGAGGAAAAAGAATGTATGGGGAACACCCTGTATATAGGCTCCCTCCAA
AGTGAGGTGTACTTCTGCATTTATGAAAAAGACTATGAGCAGTACAAAAAGCACGATATTCCCATTGCGGACGCAGAGGT
AAAGAACCGCTTTGAAATCCGGCTGAAAAATGAGCGTGCCTTTTACGCCATCCGTGACCTGTTAGAACATGACAATCCAG
AACGGACAGCCTTTCAAATCATCAACCGCTATGTCCGGTTCGTGGACAGGGACGATACGAAGCCCCGTTCTGACTGGCGT
ATCAGTGAGGAATGGGAGTGGTTTATCGGGGAACACAGGGGAAGCCTGAAACTGACAACCAAACCGGAACCCTATTCCTT
TGAACGCACCCTGCACTGGCTCTCCCATCAGGTAGCCCCCACGTTAAAGCTGGCTCTCCGTCTGGATAAGATGAACCACA
CCCAGATTGTCCATGACATCATCACCCATGCAAGGCTGACGGAGAAGCATGAAAAAATCCTGAAGCAGCAAGCCGCCGCT
GCAAAGGAGGTGGTGCTTTAA

Protein sequence : 
MLFDYVRIRFPTTDVKHIVEDVLRLKLSYFIHEDYGFYSYTEHYYLGDIFVLVSPELEKGVLLELKGRGCRQFESYLLAQ
ERSWYEFFMDVLMEDGVMKRLDLAINDKTGILNIPHLTEKCRNEECISVFRSFKSYRSGELVRREEKECMGNTLYIGSLQ
SEVYFCIYEKDYEQYKKHDIPIADAEVKNRFEIRLKNERAFYAIRDLLEHDNPERTAFQIINRYVRFVDRDDTKPRSDWR
ISEEWEWFIGEHRGSLKLTTKPEPYSFERTLHWLSHQVAPTLKLALRLDKMNHTQIVHDIITHARLTEKHEKILKQQAAA
AKEVVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0930 YP_001198296.1 Tn916, transcriptional regulator Not tested 89K Protein 8e-127 81
SSU98_0936 YP_001200494.1 Tn916, transcriptional regulator Not tested 89K Protein 8e-127 81