Gene Information

Name : CD630_33370 (CD630_33370)
Accession : YP_001089854.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : membrane protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5438
EC number : -
Position : 3899428 - 3901809 bp
Length : 2382 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 17658189, 16788196,12618468, 12568329,12568327, 17650959, 11157942,11073898, 8863741; Product type pm : putative membrane co

DNA sequence :
ATGAAGATAAGAAAGCCCATCCAGCAGGGGACAGCTCTTGTCCCTTGCCGGACAAAGGGACAAAACTCTTTTAAAAAAAT
CGGGAGTATAGCAGGAAAAGTGCTTCTGGCACTCCTGCTCATTCTCCTGCTGCTAACAGTCTTCGGCACAGCCGCCCACG
CTGCCGGACTGGTGGATGATACGGTGGATGCTGCCAACGAATACAGCAAATATCCGCTGGACAACTACCAGCTTGATTTT
TATGTAGACAGCGGATGGGACTGGCTCCCGTGGAACTGGCTGGACGGTATCGGAAAACAGGTGATGTACGGGCTGTATGC
CATCACAAATTTTATCTGGACAATCAGCCTGTACCTTTCCAACGCCACGGGGTATCTGATTCAGGAAGCCTACTCGCTGG
ACTTCATTTCCTCTACGGCGGATTCCATTGGGAAAAATATGCAGACCCTTGCAGGCGTTACCACAGGCGGCTTATCCTCG
GAGGGATTTTATATCGGGTTCCTGTTGATTCTCATTCTGGTGGTGGGGATTTACGTTGCCTACACAGGGCTTATCAAACG
GGAAACCACAAAAGCCATCCATGCCGTTGTGAATTTCGTGGTGGTGTTCGTGCTGTCCGCTGCCTTTATCGCCTATGCTC
CTGATTATATCGGGAAAATCAATGAATTTTCCGCAGACATCAGCAATGCCAGCCTGACCCTTGGCACAAAGATTGTGCTG
CCAAACTCGGAAAGCCAGGGAAAAGACAGCGTGGATTTGATACGGGACAGCCTGTTTTCCATTCAGGTCAAACAGCCGTG
GCTCCTGCTGCAATACGGAAACTCGGATGTGGAAAGTATTGGGGCTGACCGTGTGGAACACCTGCTCTCAACCAGTCCAG
ACGAAAACAACGGGCAGGACAGGGAAGAAATCGTGGTGGAGGAAATCGAAGACAGGGAAAATACCAACCTTACCATCACA
AAGACCATCAACCGCTTGGGAACCGTCTTCTTCCTGTTCATGTTCAATATCGGTATCTCCGTTTTTGTATTCCTGCTCAC
GGGGATAATGATTTTTTCACAGGTGCTTTTTATCATCTACGCCATGTTCCTGCCTGTGAGCTTCCTCCTTAGCATGGTTC
CCTCTTTTGAGGGGATGTCAAAACGTGCCATTACAAAGCTGTTCAATACCATCCTTACCAGAGCCGGAATCACCCTGATT
ATCACAGTAGCGTTCAGCATTTCCACCATGCTCTACAACCTGTCTGGGGAATACCCGTTCTTCCTGACGGCGTTCTTGCA
GATAGTGACCTTTGCCGGAATTTATTTCAAGCTGGGGGATTTGATGGGGATGTTCTCCTTACAGAGTGGGGATTCCCAAA
GCATGGGGAGCCGTATCATGCGAAGACCCCGTATGCTCATGCACGCCCATATGCACCGTTTACAGCATAAGTTAGGACGT
TCTGTGGCAGCTCTTGGGGCTGGAACGGCTGCCTACCATGCAGGAAAACAGGCTGGCTCAGACCAGAGAACTGCTTCCAG
CTCCGGCTCTTCCAAACGGACGCAGGCAGACCACAGCAGACCAGACGGACAGGCAGCACCGGAAAAGGAATCCGTATGGA
AACGGGCTGGCTCTGCGGTAGGTACGGTGGCAGATACCAAAGATAAGATAAGTGATACTGCCGGACAGCTTCGGGAGCAG
GCAAAGGATTTGCCCGTCAATGCAAAGTACGCCCTTTACCACGGGAAAACACAGGTATCAGAGGGAGTACGGGATTTTAC
TTCCAGCGTGACCCAGACCCGAACTGCCAGAGCGGAACAACGAAATGCACAGGCAGAAAGCCGCAGACAGACGATTGCAG
AACGCAGGGCAGAACTGGAACAGGCAAAACAACCGCAACAGAGAGCTTCCGAAACATCCAAAGGGGCGGCTCCTGTCCAT
GAACGCCCTGTTACTGCAAAGCAGCCAGAAAATTTCCGACATCATGCAGATACCGCTCATACAGGAAAACCAGCCATGCA
GCCAGTTTCCCCATCCATCAGGGAATGGGGACAGGTTTCTTATGAGGGGGCTGTGGCAGAACGGGCTTCGGTTCCGGTGG
TAAAATCAGCTTCCATCCACCGTGAACAGACACCGCCTGTAAGGACAGAACGACAGATAGTCCCTCCGGCTTTCCCAGAC
AAACCAGAGGAAAGACAAAAGACGGCTCCAACTGTCACACCGACTGCTCCCCGTCCGGCAAGACCTGTCCAGAACGACAC
GGCTCCTGTGATACTGGAAAGAAAACGGATTACCCCTGCGGTAAAAGAATCAAACTTTACCATCCGGCGTACCACCGCCA
GAAAGGAGTGGACAAAAACGGTAACAGCGGCTGCCAAACAGAAGAAAGGGGAGAAACCATGA

Protein sequence :
MKIRKPIQQGTALVPCRTKGQNSFKKIGSIAGKVLLALLLILLLLTVFGTAAHAAGLVDDTVDAANEYSKYPLDNYQLDF
YVDSGWDWLPWNWLDGIGKQVMYGLYAITNFIWTISLYLSNATGYLIQEAYSLDFISSTADSIGKNMQTLAGVTTGGLSS
EGFYIGFLLILILVVGIYVAYTGLIKRETTKAIHAVVNFVVVFVLSAAFIAYAPDYIGKINEFSADISNASLTLGTKIVL
PNSESQGKDSVDLIRDSLFSIQVKQPWLLLQYGNSDVESIGADRVEHLLSTSPDENNGQDREEIVVEEIEDRENTNLTIT
KTINRLGTVFFLFMFNIGISVFVFLLTGIMIFSQVLFIIYAMFLPVSFLLSMVPSFEGMSKRAITKLFNTILTRAGITLI
ITVAFSISTMLYNLSGEYPFFLTAFLQIVTFAGIYFKLGDLMGMFSLQSGDSQSMGSRIMRRPRMLMHAHMHRLQHKLGR
SVAALGAGTAAYHAGKQAGSDQRTASSSGSSKRTQADHSRPDGQAAPEKESVWKRAGSAVGTVADTKDKISDTAGQLREQ
AKDLPVNAKYALYHGKTQVSEGVRDFTSSVTQTRTARAEQRNAQAESRRQTIAERRAELEQAKQPQQRASETSKGAAPVH
ERPVTAKQPENFRHHADTAHTGKPAMQPVSPSIREWGQVSYEGAVAERASVPVVKSASIHREQTPPVRTERQIVPPAFPD
KPEERQKTAPTVTPTAPRPARPVQNDTAPVILERKRITPAVKESNFTIRRTTARKEWTKTVTAAAKQKKGEKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0925 YP_001198291.1 hypothetical protein Not tested 89K Protein 0.0 67
SSU98_0931 YP_001200489.1 hypothetical protein Not tested 89K Protein 0.0 67