|
Name : CD630_33360 (CD630_33360) Accession : YP_001089853.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : cell wall hydrolase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0791 EC number : - Position : 3898427 - 3899431 bp Length : 1005 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 17957108, 18931118,18281072, 12568329,12568327, 17650959, 11157942,11073898, 8863741; Product type pe : putative enzyme DNA sequence : ATGAAGTTAAGACACCTTTTCTTTGCCTGTTCCGGCGTGTTCGTGATGATGTTCTCCCTGCTCCTTTTGGTGGTGATTGT CTTCTCGGATGAGGAAGACGGAGGAAGCGGCGGAAACCTTATCTATGGGGGCGTGAGCGTATCACAGGAAGTCCTCGCCC ATAAGCCTATGCTGGAAAAGTATGCAAGGGAATATGGCATAGAGGAATACTTAAATGTGCTGCTCGCCATCATTCAGGTG GAATCCGGCGGCACACTGGAAGACGTTATGCAGTCCTCGGAATCTCTGGGGCTTCCCCCGAACTCTCTTAGCACAGAGGA ATCCATCAAACAAGGCTGCAAGTATTTCTCGGAACTGCTCGCAGCGGCAGAAACAAAGGGCTGTGATTTAAATAGTGTGA TTCAGTCTTACAACTACGGCGGTGGTTTCCTAGACTATGTAGCAGGGCACGGAAAAAAATACACCTTTGAACTGGCAGAG AGCTTCGCAAGGGACAAATCCGGCGGAAAGAAAGTCACCTACACCAACCCTGTTGCCGTAGAGAAAAACGGGGGCTGGCG GTATTCCTACGGAAATATGTTCTATGTCCTCTTGGTATCGCAGTACCTGACCGTGGCACAGTTTGATGATGAAACGGTAC AGGCTATCATGGAGGAAGCCTTAAAGTATGAGGGCTGGACGTATGTGTACGGGGGCGATTCCCCCTCCACTTCCTTTGAC TGTTCGGGACTGGTGCAGTGGTGCTATGGCAAGGCAGGAATCGCCCTGCCACGGACAGCACAGGAACAGTACAATGTGAC GCAGCACATCCCCCTGTCCGAAGCAAAAGCAGGGGATTTGGTCTTTTTCCATTCCACCTACAATGCCGGAACCTATATCA CCCATGTGGGGCTGTATGTGGGAAATAACCGGATGTACCATGCCGGAAATCCCATTGGTTACGCAGACCTGACAGGCTCC TACTGGCAACAGCACCTTGCCGGAGCCGGACGAATCAAACAATAA Protein sequence : MKLRHLFFACSGVFVMMFSLLLLVVIVFSDEEDGGSGGNLIYGGVSVSQEVLAHKPMLEKYAREYGIEEYLNVLLAIIQV ESGGTLEDVMQSSESLGLPPNSLSTEESIKQGCKYFSELLAAAETKGCDLNSVIQSYNYGGGFLDYVAGHGKKYTFELAE SFARDKSGGKKVTYTNPVAVEKNGGWRYSYGNMFYVLLVSQYLTVAQFDDETVQAIMEEALKYEGWTYVYGGDSPSTSFD CSGLVQWCYGKAGIALPRTAQEQYNVTQHIPLSEAKAGDLVFFHSTYNAGTYITHVGLYVGNNRMYHAGNPIGYADLTGS YWQQHLAGAGRIKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0924 | YP_001198290.1 | hypothetical protein | Not tested | 89K | Protein | 9e-117 | 78 |
| SSU98_0930 | YP_001200488.1 | hypothetical protein | Not tested | 89K | Protein | 9e-117 | 78 |
| smi_1695 | YP_003446797.1 | hypothetical protein | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-104 | 78 |
