Gene Information

Name : CD630_33300 (CD630_33300)
Accession : YP_001089846.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : HTH-type transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 3894170 - 3894526 bp
Length : 357 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 19464182, 9687377, 12568329, 12568327,17650959, 11157942,11073898, 8863741, 11839496,11292341; Product type r : regulator

DNA sequence :
ATGCGTAAAAAAGAAGATAAATATGATTTCAGGGCGTTGGGGCTTGCCATAAAAGAAGCCCGTAAAAAACAGGGTTTGAC
CCGTGAACAGGTGGGAGCAATGATTGAGATTGACCCACGCTATTTAACCAACATTGAGAATAAAGGGCAGCACCCAAGTT
TACAGGTGCTTTACGACCTTGTATCTCTGCTGAATGTATCAGTGGATGAGTTTTTCTTGCCTGCCAGCAGTCAGGTGAAA
AGCACCAAACGTAGGCAGTTAGAAAACAAAATAGACAATTTCACAGACGCTGACCTTGTTATTATGGAAAGCGTTGCAGA
TGGTATTGTCAAATCTAAGGAAGTGGGGGAAATGTAA

Protein sequence :
MRKKEDKYDFRALGLAIKEARKKQGLTREQVGAMIEIDPRYLTNIENKGQHPSLQVLYDLVSLLNVSVDEFFLPASSQVK
STKRRQLENKIDNFTDADLVIMESVADGIVKSKEVGEM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0926 YP_001200484.1 Tn916, transcriptional regulator Not tested 89K Protein 4e-38 75
SSU05_0920 YP_001198286.1 Tn916, transcriptional regulator Not tested 89K Protein 4e-38 75