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Name : CD630_33290 (CD630_33290) Accession : YP_001089845.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : RNA polymerase sigma factor Tn916-like,CTn6-Orf5 Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 3893150 - 3893572 bp Length : 423 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type pr : putative regulator DNA sequence : ATGATGAAGCCATCTGAATTTCAGACAACCATAGAGAACCAGTTTGATTATATCTGTAAAGTCGCTATGGAGGATGAACG CAAAGACTATCTCAAAGCGTTGTCCAGACAGTGTAAACGGGAAACCCTGTTCTGTGATATGGACGATTACACCGTCAATC TGTTTTCTTCCGAAGACACCTATCCATCCCACTTCCATACTTTTGAAATGGATGGATTTACTGTCCGCATTGAAAACAGC CTGTTAGCCGAAGCATTAGAAAGTCTGGACGGAAAGAAACGTGACGTTATCCTGCGATATTATTTTCTTGGATTTGACGA TACGGAAATCTCAAAAATTCTGGAAGTCAACCGTTCTACCATCCAGAGAAGAAGACACGCCGGACTGGAATTTATCAAAA AATTTATGGAGGACGAAGCATGA Protein sequence : MMKPSEFQTTIENQFDYICKVAMEDERKDYLKALSRQCKRETLFCDMDDYTVNLFSSEDTYPSHFHTFEMDGFTVRIENS LLAEALESLDGKKRDVILRYYFLGFDDTEISKILEVNRSTIQRRRHAGLEFIKKFMEDEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0919 | YP_001198285.1 | hypothetical protein | Not tested | 89K | Protein | 2e-31 | 56 |
| SSU98_0925 | YP_001200483.1 | hypothetical protein | Not tested | 89K | Protein | 2e-31 | 56 |
