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Name : CD630_32150 (CD630_32150) Accession : YP_001089731.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : ABC transporter glycine betaine/carnitine/choline ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : 3.6.3.- Position : 3760302 - 3761063 bp Length : 762 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17135193, 11781802, 18504552, 18952792,8384683; Product type t : transporter DNA sequence : ATGACACCTATTATACAATTTAAAAATATTAAAAAACAATATAATGATAAAACTATAATAGATAATCTTAATTTAGATAT AGAAAAAGGAGAGTTTTTGACTGTAATTGGTTCGTCTGGTTCTGGTAAGACAACACTCTTAAAAATGATTAATGGTCTGA TTTTGCCAGATGGAGGAAATATTTTGATAAACCAAACAGATATCAAAAACGAGGACTTAATTAAATTAAGAAGAAGAATA GGATATTGTGTACAGGGAAGTGTTCTTTTTCCTCATATGACTGTTGAAGAAAATATTTCATATGTACCAAATCTCCTAAG TAAAAAGAATAAATTAGAAGTAAAAAGTGCTGTAAACAAATGGATGGAAATAGTGGGATTGCCAAATGATATGAAAGTGC GTTACCCATCAGAATTGTCAGGTGGTCAGCAACAACGTGTAGGGATTGCAAGAGCTTTAGCTTCTTCTCCAGAAATTTTA TTAATGGATGAACCTTTTGGTGCAGTTGATGAGATTACACGAAAGCAATTACAAAAAGAGATAAAAGAAATTCATAAAAA AACAGGAGTTACGATTATCTTTATTACGCATGATATTTATGAAGCTTTGATTTTGGGAACAAAGACTTTGGTATTAAATC ATGGAGTTGTTCAACAGTATGATACTCCTGAGAATATTTTAAATACTCCTGCTAACCAATTTGTAGACCAGTTATTGAAT ATAAGAAAATCTATAATAGATGATGATAATTTAAAAGAATAA Protein sequence : MTPIIQFKNIKKQYNDKTIIDNLNLDIEKGEFLTVIGSSGSGKTTLLKMINGLILPDGGNILINQTDIKNEDLIKLRRRI GYCVQGSVLFPHMTVEENISYVPNLLSKKNKLEVKSAVNKWMEIVGLPNDMKVRYPSELSGGQQQRVGIARALASSPEIL LMDEPFGAVDEITRKQLQKEIKEIHKKTGVTIIFITHDIYEALILGTKTLVLNHGVVQQYDTPENILNTPANQFVDQLLN IRKSIIDDDNLKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 7e-47 | 45 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 5e-47 | 45 |
