Gene Information

Name : CD630_31521 (CD630_31521)
Accession : YP_001089667.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 3682161 - 3682361 bp
Length : 201 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15673505, 15691969, 16547044, 17322187,17890338,18708505, 3972994, 11839496, 11292341; Product type r : regulator

DNA sequence : 
ATGGGAATCAATTTAAAAATATTTAGGATTAAAAAAGGTCTAAAGCAACAAGAACTGGCAGATAGAGTTGGTATATCAAG
ATATTATTTATCAAACTTGGAAACAGGTAAGGCTAATAATCCAAGCAATGATTTGATGATTAAACTATCTAGAGCTTTAG
ATACAACAGTAGAAGAATTATTTTTTAGTAAGGAGGATTAA

Protein sequence : 
MGINLKIFRIKKGLKQQELADRVGISRYYLSNLETGKANNPSNDLMIKLSRALDTTVEELFFSKED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 0.066 42
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 0.045 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD630_31521 YP_001089667.1 transcriptional regulator VFG2175 Protein 0.019 42
CD630_31521 YP_001089667.1 transcriptional regulator VFG2168 Protein 0.019 42