Gene Information

Name : CD630_30710 (CD630_30710)
Accession : YP_001089585.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : glycosyl hydrolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1501
EC number : 3.2.1.-
Position : 3565624 - 3567702 bp
Length : 2079 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme

DNA sequence :
GTGATAAAAATATCTGAAGACTATATTGAAAAAAGATTTGACAATGAACTATTGCGAATAGAAGCATGGGGAAAAAACTC
TTTACGTATTAGGTCGTTTGTAGACCAAAATTTTGTTGATGAAAACTATGCTCTTAACGAAAAACCTAAGTTAAATAAAG
ATGATATTACAATTAATAAAAATGAAGATGGAAGTGCAATCATTAAAAATGGAAAGATAAAAGCTGTCTTAGACCATAGA
GATAGAATTACTTTTTATAATGATAAAAATGAAATATTATTGAAAGAATATATTCGATTAAGAGCTGTAAAACATGATGA
TGGTGGAGAAGATGTAGGGACAATTGAGATTACCAAAGACTTTAACTCTACTCTAAAGTTAAAATCAAGAGAATATCGAC
CAAGCTATAGTGGAGAATTTGAAGTAACTACTAGATTTGAATCTGAGCCTTCTGAAAAGATTTTTGGAATGGGACAATAT
CAACATAAATTTTTAGATTTAAAGAATACTGTTTTGGAGTTAGCCCAAAGAAATTCTCAAATATCAGTTCCTTTTTATAT
TTCTAGTCTAGGTTATGGACTTTTATGGAATAATCCGGGAATTGGAAAAGTATCTTTTGCTAAAAATATGACAGAATGGA
AGATGTTTTCTACAAATTTTATAGATTATTGGATTACTTGTGGAGAAAGCCCAAAAGAGTTAAATAAAAATTATTCTCAA
GTTACTGGAACTGTTCCTATGATGCCTGAAAACCTTTTAGGACTATGGCAAAGTAAACTAAGATATAGAACTTCAGAAGA
AGTTTTAGATGTTGTGAAGGAATATTCTAAAAGAGGAATTAAGCTTTCATCAATTGCAATTGACTATTTTCATTGGCCTA
AGCAAGGTGAATATAAATTTGACTTAGATTATTGGAAAAATCCTAAAGAATTAGTTAAAAAATTGAAAGAAGAGTATTCA
GTAGAACCAATAGTATCTGTATGGCCTACAGTTCAAAGTGATGCAGAAAACTACAATGATTATTTAGAAAATGGCTATTT
AGTCAATGTTAATCGTGGTGTTAGAATGACAATGCAAATTCAAGGAAATACAGTCTTTGTAGATATGACAAATGAAAATG
CAAGAGAATATGTTTGGGATAGAATAGATAAAAATTATAAACAACTTGGGATTGACTATTATTGGTTAGATGTAGCTGAA
CCTGGCTATTCTGTGTATGATTTTGATAACTATAGATATAAAAAAGGAAATGTTTTAAGTTGTGGTAATATTTATCCTAT
TGATTATTTAAAAATGATTTATGATGGTTTACATAATGACATAGAGTCTGTTGTAACTCTTGTAAGAGGAGCTTGGGCAG
GAGCTCAAAAGTATGGAGCTTTAGTATGGTCTGGTGACATTGATTCTAGTTTTGAGGCTTTTAATAATCAAGTCAATACA
GGGTTAAATATGGGACTGGCAGGTATACCATGGTGGACTACTGATATTGGAGGGTTCCATGGAGGAAATCCTAAAGACCC
AGAATTTAGAGAACTTATGGTAAGATGGTTCCAATATGCTACTTTTTCACCAATTTTGAGAATGCATGGAGATAGATTGC
CTCATAGTAAACCATTATCAAATAAAGGTGGAGGCTCAATGGTAACTGGAGCTCCTAATGAAATATGGTCTTATGGTGAA
GAAGTTGAAGTAATTCTTACAAAATTCATAAAAATTAGAGAGAGCTTAAAAACTTATTTAAAAAAACTGATGAAAGAAGC
GCATGAAGATGGAACACCAGTTATGAGAACTTTATTTTATGAATTTCCTGAAGATGATAAAACTTGGGAGGTGGATAATA
CATATATGCTTGGAGATGAAATTTTGGTAGCTCCAATAATGAATTATAAAGATAGAAGTAGAAAAGTATATTTACCAAAA
GGACATACATGGGAAAATATATTTAGTGGAGTTAGTTATGAAGGTGGGAAAACTTATGAAGTTGAATGCCCGCTGGAAGA
AATTCCTATTTTCCTAAAGCAAGATTCCAGTTATAATTTTAAAGAACTAAAAAATATTTTGGGAGAGGTGAAATCATAA

Protein sequence :
MIKISEDYIEKRFDNELLRIEAWGKNSLRIRSFVDQNFVDENYALNEKPKLNKDDITINKNEDGSAIIKNGKIKAVLDHR
DRITFYNDKNEILLKEYIRLRAVKHDDGGEDVGTIEITKDFNSTLKLKSREYRPSYSGEFEVTTRFESEPSEKIFGMGQY
QHKFLDLKNTVLELAQRNSQISVPFYISSLGYGLLWNNPGIGKVSFAKNMTEWKMFSTNFIDYWITCGESPKELNKNYSQ
VTGTVPMMPENLLGLWQSKLRYRTSEEVLDVVKEYSKRGIKLSSIAIDYFHWPKQGEYKFDLDYWKNPKELVKKLKEEYS
VEPIVSVWPTVQSDAENYNDYLENGYLVNVNRGVRMTMQIQGNTVFVDMTNENAREYVWDRIDKNYKQLGIDYYWLDVAE
PGYSVYDFDNYRYKKGNVLSCGNIYPIDYLKMIYDGLHNDIESVVTLVRGAWAGAQKYGALVWSGDIDSSFEAFNNQVNT
GLNMGLAGIPWWTTDIGGFHGGNPKDPEFRELMVRWFQYATFSPILRMHGDRLPHSKPLSNKGGGSMVTGAPNEIWSYGE
EVEVILTKFIKIRESLKTYLKKLMKEAHEDGTPVMRTLFYEFPEDDKTWEVDNTYMLGDEILVAPIMNYKDRSRKVYLPK
GHTWENIFSGVSYEGGKTYEVECPLEEIPIFLKQDSSYNFKELKNILGEVKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0551 NP_814321.1 glycosyl hydrolase Not tested Not named Protein 0.0 70
ef0077 AAM75281.1 EF0077 Not tested Not named Protein 0.0 70