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Name : xynC (CD630_30700) Accession : YP_001089584.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : PTS system xyloside-specific transporter subunit IIC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3715 EC number : - Position : 3564845 - 3565624 bp Length : 780 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17183209, 11679321, 11160802, 10954012; Product type t : transporter DNA sequence : ATGGAGCCACAATTATGGCAATTATTATTAATCGTACTATATGGATTTTTTATAAACTATGAAAAAAATTCAACAATGTT TGGAACATATCAACCAGTAACAGCAGGTTTTATTACTGGTCTTATCTTAGGAGATATAAATACAGGGTTATATATTGGAG GTACATTACAGCTATTATCATTAGGTATTAGTAACTTTGGTGGAGCATCAATACCTGATTATCAAACAGCAAGTATAGTA GCCACATTTATAACTATTACGACTAAGCAAGAAGCATCTGTAGGAATCTCTATAGGTATTCCAGTTGCTTTATTGATGGT ACAATTAGATGTTCTTAGAAATACTATTGGTATATGGCTAGTTCATAAAGCAGAAGATGGAGCTAAAAAAGGAAATTATA AAAATATAACCTATATGCAAATGTTAGGAGTACTATTAACAGCAGCTACAACAGGTATTCCAGTTGCTCTATCTGTAATA TTTGGACCTTCTTTAATTAATACCATTTTGAAATATACACCTGAATGGTTAACAGGTGGTTTAACAGTAGCTGGAGGACT ACTTCCAGCAGTAGGGATAGGATTATTACTTAGATATCTTCCTGCTAAGGAGTATTTTAGTTACTTAGTAATTGGTTTTG TTTTAGCAGTATATATGAAAGTACCATTATTAGGTGTAGCTTTAATTGGTGGAGCAATTGCACTTATAATTTACAAAAAG AATTTGGAAAATCAAGAACAACAATATACTGTAGTAGGAGGTATGGACGAAGATGAGTGA Protein sequence : MEPQLWQLLLIVLYGFFINYEKNSTMFGTYQPVTAGFITGLILGDINTGLYIGGTLQLLSLGISNFGGASIPDYQTASIV ATFITITTKQEASVGISIGIPVALLMVQLDVLRNTIGIWLVHKAEDGAKKGNYKNITYMQMLGVLLTAATTGIPVALSVI FGPSLINTILKYTPEWLTGGLTVAGGLLPAVGIGLLLRYLPAKEYFSYLVIGFVLAVYMKVPLLGVALIGGAIALIIYKK NLENQEQQYTVVGGMDEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0552 | NP_814322.1 | PTS system transporter subunit IIC | Not tested | Not named | Protein | 8e-84 | 84 |
| ef0078 | AAM75282.1 | EF0078 | Not tested | Not named | Protein | 6e-84 | 84 |
