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Name : xylR (CD630_30660) Accession : YP_001089580.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG1940 EC number : - Position : 3561800 - 3562960 bp Length : 1161 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 18633279, 17933895, 12902297, 11750820,10411273, 9286992,1569030; Product type r : regulator DNA sequence : TTGGTTACTGATAAATACACTATTCGAGAAATGAATGAAAGATTGGTACTTGAACAAATTATAAAAAATGGTCCTATTTC TAGGGCAAGTATAGCTTCTACTATAGGATTGAATAAAGCAACTATATCCGCTATTACCAAAAAACTTATTGATGAATCTC TAGTTCATGAAATAGGAATTGGAAATAGTACTCATAGTGGCGGAAGAAAACCCATATTATTAGTATTTAATAAATGTGCA GGGATTTCTTTAAGTATGGACATTGGATACGACTATATATTTTCTTCTCTATCTTACTTAGATGGAACTATTATAAATTC TAAGAAATTAACAGATATACAAGTAAGTAAAGACAATGTTATACAATTGATAGATGAAATTATAAATAGTTATAACATAT CCAAAATAGACACTCCTTATAAGGTAATTGGTCTTACTTTGGCTATACATGGGATTACTTGTGAAAATAAAGTATTGTTT ACTCCATATTACAATCTTAATGAGATTGACTTATATAGCATCCTTAGCAAAAAGTATGACTTTCCTATTCACATAGAAAA TGAAGCAAACTTAACAGCTTTAGCTGAGAATACTTTTTCAACTGTACATAACTCACTACTTAGTCTCAGTATTCACAGTG GATTTGGTTCAGGCATTATAATAAATAATAAATTATATAGTGGCAGAAATGGTATGAGTGGAGAAATTGGTCACACTATC ATCATGCCTAATGGTAAACTATGTCCTTGTGGAAATCGTGGCTGTTTAGAACAGTATTGTTCAGAAAAAAAGGTATTTGA ACAGCTTTCTTCTTTAGAAAATATTCCTAAAATAGATTCTGATATAGTAAAGCAACTATATTATGAAGATAACCAGAATG CCAAAAAAGTTATTCATGAGTTTTGTAGTTACTTAACAATAGCTATAAATAATGCTATTACAACTTATGCTCCTGAAATA ATATATTTAAATAGCCAAATAATTAGTGATATCCCTGAGATATTACAGATTACAAAAGATATGTTAGTTAGCTCTTTTAA CAAAGGAATAAATATAGAAATTTCATCATTAGGGTCTGAGGCATCTCTATATGGTGGCTCTGCCGTAAATATCAAGAGCT TTTTGAATATACAAAATTTAACTTTAATTAATGAAATATAA Protein sequence : MVTDKYTIREMNERLVLEQIIKNGPISRASIASTIGLNKATISAITKKLIDESLVHEIGIGNSTHSGGRKPILLVFNKCA GISLSMDIGYDYIFSSLSYLDGTIINSKKLTDIQVSKDNVIQLIDEIINSYNISKIDTPYKVIGLTLAIHGITCENKVLF TPYYNLNEIDLYSILSKKYDFPIHIENEANLTALAENTFSTVHNSLLSLSIHSGFGSGIIINNKLYSGRNGMSGEIGHTI IMPNGKLCPCGNRGCLEQYCSEKKVFEQLSSLENIPKIDSDIVKQLYYEDNQNAKKVIHEFCSYLTIAINNAITTYAPEI IYLNSQIISDIPEILQITKDMLVSSFNKGINIEISSLGSEASLYGGSAVNIKSFLNIQNLTLINEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0550 | NP_814320.1 | xylose repressor | Not tested | Not named | Protein | 1e-67 | 42 |
| ef0076 | AAM75280.1 | EF0076 | Not tested | Not named | Protein | 8e-68 | 42 |
