|
Name : xylA (CD630_30640) Accession : YP_001089578.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 3558609 - 3559946 bp Length : 1338 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9617801, 8163183, 19898542, 8801434; Product type e : enzyme DNA sequence : ATGAGTGAAATATTTAAAGGAATAGGACAGATAAAATTTGAAGGAGTAAAATCTGACAATGAATTAGCATTTAGATACTA CAATCCTGAACAAGTGGTAGGTAATAAGACTATGAAAGAACACTTAAGATTTGCAATGAGCTATTGGCATACTTTATGTG GAGAGGGTAATGACCCATTTGGAGTAGGCACAGTAGAGAGACCTTGGAATAATATAACAGACCCAATTGAGATAGCAAAG ATTAAAGTTGATGCAGGATTTGAATTTATGTCTAAGATGGGAATTGAGTATTTCTGTTTTCATGACAGAGATATAGCACC AGAAGGAAGAGATTTAGAAGAGACAAATAAGATATTAGATGAAATAGTTGAGTATATAAAAGTTAATATGGAAAAGACAG GTATAAAGTTATTATGGGGAACTGCCAATATGTTTGGAAATCCAAGATTTGTTCATGGTGCATCTACAACATGTAATGCA GATGTATATGCATATGCAGCAGCTCAGGTTAAAAAAGCTATGGAAATAACTAAGTACTTAGGAGGAGAAAATTTTGTATT CTGGGGTGGAAGAGAAGGTTATGAAACTTTACTTAACACTAATACAGAACTTGAAATGGATAACTTTGCAAGATTCTTAC AAATGGCTGTAGACTATGCTAAGGAAATAGGATTCACTGGACAATTCTTAATAGAGCCTAAGCCAAAAGAGCCTACTAAA CATCAATACGATTTTGATACTGCTACTGTTTTAGGATTTTTAAGAAAGTATAATCTGGATAAATACTTCAAAATGAATAT AGAAGCAAACCATGCAACACTTGCAGGACATACTTTCCAACATGAATTAAATATAGCAAGAATAAACAATGTTTTAGGTA GTATAGATGCAAATCAAGGAGACCTATTATTAGGTTGGGATACAGACCAATTTCCAACAAATATATATGATGCAACACTT GCTATGTATGAAGTGTTAAAGCAAGGTGGAATAGCACCAGGAGGGTTTAATTTTGACTCTAAAGTAAGAAGAGCATCTTT TGAGGTAGAAGACTTATTCCTAGCTTATATTGCAGGAATGGATACATTTGCAAAGGGATTATTAATAGCACATAAATTAT TAGAAGATGAGGTATTTGAAAACTTTACTAAAGAAAGATATGCAAGTTTTAGTGAAGGTATAGGTAAGGATATAGTAGAA GGTAAGGTTGGATTTAAAGAGTTAGAATCTTATGCACTGCAAATGCCAGTTATAAAGAATAAGTCTGGAAGACAAGAAAT GTTAGAAGCTATACTTAACAGATATATATATGAAGTAGATACAATTTCTAATAAGTAA Protein sequence : MSEIFKGIGQIKFEGVKSDNELAFRYYNPEQVVGNKTMKEHLRFAMSYWHTLCGEGNDPFGVGTVERPWNNITDPIEIAK IKVDAGFEFMSKMGIEYFCFHDRDIAPEGRDLEETNKILDEIVEYIKVNMEKTGIKLLWGTANMFGNPRFVHGASTTCNA DVYAYAAAQVKKAMEITKYLGGENFVFWGGREGYETLLNTNTELEMDNFARFLQMAVDYAKEIGFTGQFLIEPKPKEPTK HQYDFDTATVLGFLRKYNLDKYFKMNIEANHATLAGHTFQHELNIARINNVLGSIDANQGDLLLGWDTDQFPTNIYDATL AMYEVLKQGGIAPGGFNFDSKVRRASFEVEDLFLAYIAGMDTFAKGLLIAHKLLEDEVFENFTKERYASFSEGIGKDIVE GKVGFKELESYALQMPVIKNKSGRQEMLEAILNRYIYEVDTISNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 4e-119 | 61 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 3e-119 | 61 |
