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Name : serS1 (CD630_28400) Accession : YP_001089353.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : seryl-tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3320190 - 3321461 bp Length : 1272 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 19721072, 9851985, 7540217, 3029694; Product type e : enzyme DNA sequence : ATGCTTGATATAAAAAGAATAAGAGAAAATTTAGATTGTATAAAAAAAGCAATGGAAAGAAGGGGCGAAAAAGACTTTAA CCTTGATGAAGTAGTTAAGTTAGATGATGAAAGAAGAAAGATTCTTCAAGAAGTTGAAGTTATGAAAAATGAATTAAATA CAGCATCTAAAAATATACCAAATCTTATAAAAGAAGGTAAAGATGTAGAAAATGAAAAGATTAAACTAAAAGAGTTATCT GATAAAATTAAGGTAATAGACCAAAATCTTAAAGAAGTAGAAGATAAGATGGAATACCTATTAATGAGAATACCAAATGT ACCACATCCAGAAGTACCACAAGGTGAAACTGATGAAGATAATGTTGAAGTAAGAACTTGGGGAAAGACTACTACCTTTG ATTTTGAATCTAAGGCTCATTGGGAAATTGGAACAGAATTAGGTATACTTGATTTTGAAACAGCTAGTAAAATAACTGGT TCAAGATTTACTCTTTACAAAGGATTAGGTGCTAGATTAGAGAGAGCATTATTAAATTTTTACTTAGACACGAATACAAA AGTAAATGGATATACAGAAGTTATTCCACCATTTATGGCAAATAGAAATAGTTTTTTAGGTACAGGACAGTTACCTAAGT TTGAAGAAGATATGTTTAAAATAGAAGGTCTGGACTATTTTATGATTCCAACATCAGAAGTTCCTTTAACTAATATACAT GCTAATGAAATACTTAAATTTGAACAATTACCAATAAATTATACAGCTTATACTCCATGTTTTAGGTCAGAAGCTGGTTC TGCTGGAAGAGATACAAGAGGTTTAGTAAGACAGCATCAGTTTAACAAAGTAGAAATGGTTAAAATAGTTGCACCAGAAG AATCTTACAATGAGTTAGAAAAGCTTACTAACAATGCGGAAACTATGCTACAATTATTGAATCTGCCTTATAGAGTAGTA AAGATATGTACAGGTGATTTAGGATTTACGGCTTCTTTTAAATATGATGTAGAAGTTTGGATGCCAAGTTACAATAGGTA TGTTGAGATTTCATCTTGTTCAAACTGCGAAGATTTCCAAGCTAGAAGAGCAGGAATAAGATTTAAAAGAGATAAAGATT CTAAAACTGAATATGTACACACATTAAATGGCTCTGGGTTAGCTATTGGAAGAAGTGTTGCAGTTATATTAGAAAATTAT CAACAAGAAGATGGTTCTGTGGTTGTTCCTGAAGTTTTAAGAGCATATATGGGAGTTTCTGTTATTAAATAA Protein sequence : MLDIKRIRENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEVEVMKNELNTASKNIPNLIKEGKDVENEKIKLKELS DKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETDEDNVEVRTWGKTTTFDFESKAHWEIGTELGILDFETASKITG SRFTLYKGLGARLERALLNFYLDTNTKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLDYFMIPTSEVPLTNIH ANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYNELEKLTNNAETMLQLLNLPYRVV KICTGDLGFTASFKYDVEVWMPSYNRYVEISSCSNCEDFQARRAGIRFKRDKDSKTEYVHTLNGSGLAIGRSVAVILENY QQEDGSVVVPEVLRAYMGVSVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-113 | 56 |
