Gene Information

Name : CD630_27830 (CD630_27830)
Accession : YP_001089296.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Virulence
Product : glycosyl transferase family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 3235407 - 3236093 bp
Length : 687 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme

DNA sequence : 
ATGTCTGGATATACTAATGATGAGTGTGAAATACCTAAAATTAAAAGCTATCCAGGGGCAGATAAAGAAATTGCAAGTGA
GATTGACTATAGCATAGTAAAAGGAACAGTTTTATTCGACTTGTACCAAAGAATTATGGATTTAGTTTTATCTATAATAG
GACTTGTGATAGGTTTACCTTTAATAGCAATATTTGGAATTCTTATTAAAATAGAGGACAAAGGACCAATAACTTATAAG
CAAGAAAGACTAGGAAAATGCGGGAGAAGATTCTATATATATAAATTGAGATCTATGAGAACAGACGCAGAAAAATTTGG
CGCACAATGGGCTGAAAAAGATGATCCTAGAATAACTAAGGTTGGAAAGTTTATTAGGAAAACTAGAATTGATGAGATTC
CACAGCTGTTTAATATATTAAAGGGGGACATGGGCTTAATAGGTCCTAGACCAGAGAGACCGAACTTTACTGTTCAATTT
AATGAGGAAATACCTGGATTTATCAACAGACTCGCTATAAAACCTGGGCTTACAGGTTGGGCACAAGTAAATGGTGGATA
CGAAATCACTCCTGAAGAAAAACTTAAAGAAGATATTTACTATATAAAAAATAGGAGTATATTACTTGACTTTAAGATAC
TCTTTAAAACTGTTAAAGTAGTATTGACAGGAGACGGAGCTAGATAA

Protein sequence : 
MSGYTNDECEIPKIKSYPGADKEIASEIDYSIVKGTVLFDLYQRIMDLVLSIIGLVIGLPLIAIFGILIKIEDKGPITYK
QERLGKCGRRFYIYKLRSMRTDAEKFGAQWAEKDDPRITKVGKFIRKTRIDEIPQLFNILKGDMGLIGPRPERPNFTVQF
NEEIPGFINRLAIKPGLTGWAQVNGGYEITPEEKLKEDIYYIKNRSILLDFKILFKTVKVVLTGDGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-25 47
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD630_27830 YP_001089296.1 glycosyl transferase family protein VFG1369 Protein 1e-22 44
CD630_27830 YP_001089296.1 glycosyl transferase family protein VFG1309 Protein 1e-24 42