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Name : CD630_27690 (CD630_27690) Accession : YP_001089282.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3218877 - 3220790 bp Length : 1914 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 15661000; Product type pm : putative membrane component DNA sequence : ATGCGAGAAAGTATAGATTTAGAGAAAGAAAGCTTTTTTAATAGGCTTTTTAAAAAATATAAATTTAGACATTTAACACT ATTAATTCTAGATATTTGTAGCGTACTAGTAGCGTTTCGAATGTCTTTAAGCTTGACAGGTAATTTAAATGCATTTACCA CTAATGATATAATAATTTCAGTATGTATATATATAGTACTTCATATAGTATCATTTAGATTGTTTAAGTGCTACAACACA TTATGGAGATATGCAGGAGAAGAAGAAATTATATCTATTTTTGTGGCAACTTTAGCTTATTTAATTCCGATTTATATAAT AAATAAATTATTAGGGTTTGATTATCCTATAATGTTTTATGTATTAAATACAATATTTATTATAATGTTTACAAGTGGCG CAAGAATAGCCTATAGAGCTATAAGAATAGTCATGAACAAGACATATTCTAGAGGAAAGGTTTCAAATATCCTTATAATT GGTGCAGGAGATGCAGGAGAAATGGTTATACAGGAACTAAAAAGAAATCCAGAACTTAAAAAAGTAGCAGTGGCTATAAT TGATGATGATAAAAATAAAATTGGAAGAATAATCCATAATGTGAAAATTGTAGGAACAACTTCAGATATAAAAGATGTGG TAGAAAAGTACAATGTAGATGAGATAATCTTTTCAATAGCAAACATAGAGAAGCGTAGAAAAAAAGATATTATTGATATA TGTAAAAACACTAACTGTAAAATAAAGACAATACCAGGAATTTACGAAATTATAGATGGAAAAGTTGATATAAAACAGAT TAGAGAAGTAGAGATAGAAGACTTGTTGGGTAGAGAGCCTATAAAAACAAATTTAAGAGAGATAAGTAATTACATTGAGG GAAAAGTAATCTTAATAACTGGAGGAGGAGGCTCAATTGGTTCAGAGCTTTGCAGACAGATTGCAGGATTTAATCCTAAA GAGCTTATTATAGTTGATAATTATGAAAATAATGCTTACTCAATACAACAAGAATTACTTAGAAAATATAAAAATAAATT AGATTTGAAGACAGTAATAGCATCAATAAGAGAAGAAAAAAGAATGGATGAAATATTTAATAAATATAAACCAGAAGTGG TATTTCATGCAGCAGCACATAAACATGTTCCTCTTATGGAATCGAGCCCTGGCGAAGCTATAAAGAATAATATATTTGGA ACTTTAAACATAGCTGGCTTGTCTTCAAAATATAGAGCTAAGAAATTTGTCCTTATATCTACAGATAAGGCTGTAAACCC TACTAACATAATGGGAGCTACTAAAAGAGCTGCTGAAATGATTATACAGACTATGAATGCTGAAAGCCAGACTGAATTTG TTGCTGTTAGATTTGGAAATGTGCTTGGTAGTAATGGTAGTGTAATTCCACTTTTTAAGAAGCAAATTGAAGATGGCGGA CCAGTGACAGTTACTCATCCAGATATTATTAGATATTTTATGACAATACCAGAAGCAGTAGGCTTAGTTATACAAGCTGG GGCTATGGCTAAAGGTGGAGAAATATTTGTACTTGATATGGGAGAACCTGTAAGAATATTGGATTTAGCAAAAAACTTAA TTAAATTCAGTGGATTTGAGCCAGATGTTGATATAAAAATTGAATTTTCTGGTCTTAGACCAGGAGAAAAGTTGTATGAA GAACTACTTATGTCAGAAGAAGGTCTGTTGGATACAGAGCATAAAAAGATTTTTATTGGTAGACCAATAGATGTTGATAG AGAAAAAATAACAAAATACTTAAAACTTTTAAGAGAAATTACTAACAATGAAGAGGTTGAAAAAATAGATGGTATTATGA GGGAATTAGTGCCAACTTATATTAAACCAGAAGATGCTAATATCAAAGAAATTGCAACAACTAGAGAAAAGTAG Protein sequence : MRESIDLEKESFFNRLFKKYKFRHLTLLILDICSVLVAFRMSLSLTGNLNAFTTNDIIISVCIYIVLHIVSFRLFKCYNT LWRYAGEEEIISIFVATLAYLIPIYIINKLLGFDYPIMFYVLNTIFIIMFTSGARIAYRAIRIVMNKTYSRGKVSNILII GAGDAGEMVIQELKRNPELKKVAVAIIDDDKNKIGRIIHNVKIVGTTSDIKDVVEKYNVDEIIFSIANIEKRRKKDIIDI CKNTNCKIKTIPGIYEIIDGKVDIKQIREVEIEDLLGREPIKTNLREISNYIEGKVILITGGGGSIGSELCRQIAGFNPK ELIIVDNYENNAYSIQQELLRKYKNKLDLKTVIASIREEKRMDEIFNKYKPEVVFHAAAHKHVPLMESSPGEAIKNNIFG TLNIAGLSSKYRAKKFVLISTDKAVNPTNIMGATKRAAEMIIQTMNAESQTEFVAVRFGNVLGSNGSVIPLFKKQIEDGG PVTVTHPDIIRYFMTIPEAVGLVIQAGAMAKGGEIFVLDMGEPVRILDLAKNLIKFSGFEPDVDIKIEFSGLRPGEKLYE ELLMSEEGLLDTEHKKIFIGRPIDVDREKITKYLKLLREITNNEEVEKIDGIMRELVPTYIKPEDANIKEIATTREK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-94 | 46 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-97 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CD630_27690 | YP_001089282.1 | polysaccharide biosynthesis protein | VFG1300 | Protein | 7e-96 | 45 |
