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Name : ptsG-BC (CD630_26670) Accession : YP_001089178.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : PTS system glucose-specific transporter subunit IIBC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : 2.7.1.69 Position : 3079813 - 3081384 bp Length : 1572 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17183209, 3060316, 2120236; Product type t : transporter DNA sequence : ATGAAAAAAGTATTTGGTGTTTTACAAAAAGTAGGAAAATCTCTAATGCTACCAGTTGCATTACTTCCTGCAGCAGGTAT ATTACTTGGCGTGAGTAATGCTTTAGCAGGAGACGCATTGTTGGCTCATTTTCCAGTTTTGGCGAATCCTACATTTCAAC TTATAATAAGTATAATGGAAAGTTCAGGTCAAATTATATTTAATAACTTACCACTTATATTTGCAGTTGGGGTAGCTGTT GGTTTAACTGAAGGAGAAGGTGTTGCAGCATTGGCAGCCATAGTAGGTTTTTTAATTCTCAATACATCTATGGGTGTTAT GGCGGGTGTTACAGAAGATATGGTAGACAATTCTATGTATGCAAATATTGTTGGAATACCAACAATTCAAACAGGGGTAT TTGGTGGTATTATTATAGGGATAGTGGCTGCTTATCTTTATAAAAAGTTTTATAAAATTGAATTACCTCAGTATCTAGGT TTTTTTGCAGGTAAAAGATTTGTACCAATCGTTACTTCATTAGTTGCTATAGCAATAGGAATTATATTGTCTTTTATTTG GCCTCCAATACAAGAGGGATTACTTAGTTTCTCAAAAAATGTTATAGAAGCAAATCAAACACTAGCAGCATTTATGGAAG GTTCTTTGGAAAGACTATTAATACCATTTGGTTTGCATCATGTTTTCCATAATCCATTTTGGTATCAATTTGGAGAATAT GTAAATAAAGCTGGTGAGCTTGTAATGGGTGACCAAAAGATATTCTTTGCTCAACTTAAAGATGGAGTAAATTTCACAGC AGGTACTTTTATGACAGGTGCATTTCCATTTATGATGTTTGGTCTTCCAGCAGCAGCTCTTGCTATGGTGCATGAAGCAA AGCCAGAAAAGAAAAAATTTGTAGCAGGTATAATGGCATCAGCAGCATTAACCTCTTTTTTAACAGGAATAACCGAGCCA ATAGAGTTTGCGTTTTTATTTGTTGCACCAGTATTATTTGCAATACATTGTTTATTTTCAGGTTTATCATACGCAATTAT GCAATTATTAGGAGTTAAAATTGGATTCACATTTTCAGGAGGATTAATAGATTTCTTATTATTTGGTGTTCTTCCTAATA GAACTCCATGGTACTTGGCTATCTTGGTAGGTATTGGTTTTGCAGTATTATACTATAGTGTATTTAGATTTATGATAAGA AAGTTTAATTTAAAGACACCAGGAAGAGAAGATGAGTCAGAAACTAACGCTGAAGTCATTGAAATGTCTAAGAATGAATT AGCATCAGAGATTTTGATTGCTTTAGGAAATAAAGACAACTTAAAGAGCCTAGATGCGTGTATAACAAGACTTAGATTGG TTGTAAATGATATAAATAAAGTAGATAAAGAAAAATTGAAATCACTTGGAGCAGCAGGTGTTATGGTTATTGGCAACAAT GTTCAAGCTATATTTGGACCAAAATCAGATTCAATAAAGTCTGATATAAAAGATATAATAGAGGGAAAAACAAAGGTTGA AAGTACTGTTACTAAAAATGTTGATAAAAATAAAGTGAAAAAAAATATGTAA Protein sequence : MKKVFGVLQKVGKSLMLPVALLPAAGILLGVSNALAGDALLAHFPVLANPTFQLIISIMESSGQIIFNNLPLIFAVGVAV GLTEGEGVAALAAIVGFLILNTSMGVMAGVTEDMVDNSMYANIVGIPTIQTGVFGGIIIGIVAAYLYKKFYKIELPQYLG FFAGKRFVPIVTSLVAIAIGIILSFIWPPIQEGLLSFSKNVIEANQTLAAFMEGSLERLLIPFGLHHVFHNPFWYQFGEY VNKAGELVMGDQKIFFAQLKDGVNFTAGTFMTGAFPFMMFGLPAAALAMVHEAKPEKKKFVAGIMASAALTSFLTGITEP IEFAFLFVAPVLFAIHCLFSGLSYAIMQLLGVKIGFTFSGGLIDFLLFGVLPNRTPWYLAILVGIGFAVLYYSVFRFMIR KFNLKTPGREDESETNAEVIEMSKNELASEILIALGNKDNLKSLDACITRLRLVVNDINKVDKEKLKSLGAAGVMVIGNN VQAIFGPKSDSIKSDIKDIIEGKTKVESTVTKNVDKNKVKKNM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2642 | YP_859416.1 | PTS system, glucose-specific IIBC component | Not tested | Not named | Protein | 1e-104 | 52 |
| ef0067 | AAM75272.1 | EF0067 | Not tested | Not named | Protein | 2e-75 | 43 |
