Gene Information

Name : CD630_25340 (CD630_25340)
Accession : YP_001089048.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 2928226 - 2928909 bp
Length : 684 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17135193, 11781802, 18504552, 18952792,8384683; Product type t : transporter

DNA sequence : 
ATGAAAATACTATATACTGAAAATTTATCAAAGCATTATGGAAAAGGAGAAAGCTTAGTAAGAGCTTTGGACAATGTTGA
CTTAGAAATAAATGAAGGTGAATTTGTTGCAATAATAGGAAAATCAGGTTCTGGAAAAAGTACACTTTTGCATATGATTG
GAGGTCTTGATATACCTACATCTGGGAAGGTGTATATAGATAATAAAAATATATTTACATTAAAAGAAGAAGAACTTGCT
GTATTTAGAAGAAGAAAAATAGGGTTTATATTTCAAAGCTATAATTTAATTCCATCTCTTAATGTATGGGAAAATGTAGT
GTTGCCAATCGGTTTAGATGGTAGAGAAGTAGATGAATCTTTTATAAAAGAACTTTTAAAATCATTAGGACTTGAAAATA
AACACGACGTTTTACCAAATACATTATCAGGTGGTCAACAACAAAGGGTGGCAATAGCAAGAGCATTAGCTACAAGACCA
GCTATAATACTTGCTGATGAACCAACTGGAAACCTAGATTCTAAAACGTCTGATGAGGTTATGAGTATATTAAAATCTAT
GTCTAAGAAGTACAGTCAAACTCTAGTTATGATAACTCATGATGACAGTATAGCCCAAATGGCTGATAGAGTTATATTCA
TAGAAGATGGCAGGGTGTCAAAGGTTGGTGATAAAAATGATTAA

Protein sequence : 
MKILYTENLSKHYGKGESLVRALDNVDLEINEGEFVAIIGKSGSGKSTLLHMIGGLDIPTSGKVYIDNKNIFTLKEEELA
VFRRRKIGFIFQSYNLIPSLNVWENVVLPIGLDGREVDESFIKELLKSLGLENKHDVLPNTLSGGQQQRVAIARALATRP
AIILADEPTGNLDSKTSDEVMSILKSMSKKYSQTLVMITHDDSIAQMADRVIFIEDGRVSKVGDKND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 49
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-40 48
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-40 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-40 48
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 9e-37 41
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD630_25340 YP_001089048.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-68 66
CD630_25340 YP_001089048.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-63 58
CD630_25340 YP_001089048.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-41 47
CD630_25340 YP_001089048.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-36 45
CD630_25340 YP_001089048.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-36 41