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Name : CD630_22230 (CD630_22230) Accession : YP_001088737.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : extrachromosomal origin protein Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 2574631 - 2575125 bp Length : 495 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin DNA sequence : GTGTGTATTTTTTTCTCTTTTTTTTTGAAATTTATCGAAGATTTAACGCCCTCCCACCGTGATAGGAGTAAGCAAGGTTA TTTAACTCCTTGCGATGGAAAGACAATTGAACATCAATTCGACAGTTTCTGTAAAACAGTTTTGCGTAACTATGCTAGAG ATATTTATGACGAAAATAAACGCAGAAATGATTATTTGGTATCTCTCGAATCTTTGTCACTTGCAGAATTAAGTAAATTG AGTATTTTAGATGATTATGATTCTAACTACATCTGTATGGTTTCTTACGACTACAACATACGAATTGAAGATGTATTAAT GGCGCAAGCAATCGGAAAACTTACAAAAAGAAAACAAGATATAATTCTACTTTCATTCTTTCTCAACATGACAAATGCTG ACATAGCAACATTGATGGATTTAGCAGAAAATACCATACATTATCACAAAACAAATACACTAAAAGAGTTGAAAGAACTC ATGCAGGAACATTGA Protein sequence : MCIFFSFFLKFIEDLTPSHRDRSKQGYLTPCDGKTIEHQFDSFCKTVLRNYARDIYDENKRRNDYLVSLESLSLAELSKL SILDDYDSNYICMVSYDYNIRIEDVLMAQAIGKLTKRKQDIILLSFFLNMTNADIATLMDLAENTIHYHKTNTLKELKEL MQEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00739 | YP_008394263.1 | DNA-directed RNA polymerase specialized sigma subunit | Not tested | Not named | Protein | 1e-12 | 42 |
