Name : CD630_19610 (CD630_19610) Accession : YP_001088467.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : 3.6.3.- Position : 2260732 - 2261397 bp Length : 666 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17135193, 11781802, 18504552, 18952792,8384683; Product type t : transporter DNA sequence : ATGAGTATTTTACAAGTAATTAATTTAAAGAAATATTATGGACAAAGTTCAAACATTACAAAAGCTCTTGATGGTGTAAC TCTATCTATTGAAAAAGGCGAATTTATTTCTATTGTAGGTACATCTGGTAGTGGCAAATCCACATTATTAAATATGATGG GAGGATTAGATAATCCTACATCTGGAAAGGTTATTATAAAGGGTAAGGAATTATCTACTATGTCTGATGAACAGCTTACA ATCTTTAGACGCAGAAATATAGGTTTTATATTTCAAAATTATAATCTTGTTCCTTTACTTAATGTATATGAAAATATTAT CTTACCAATAGGATTGGATGGAGAGACCATAGATAAGGATTTTATAAATGAAATTATAAATATGCTTTCTCTTGAAGAAA AATTATATGATATGCCAAGTAATCTTTCTGGTGGTCAACAGCAACGTGTTGCTATAGCTAGAGCACTTGTAACAAAACCA GCTATTATACTAGCTGATGAACCAACAGGTAACCTTGATAGTAGAACTAGTTCAGATGTACTGAGTTTACTTAAAGTGAC AAGTAAAAAATTCAACCAAACAATTGTAATGATTACACACAATAATGAAATTGCACAACTAACTGATAGAATTATTCGTA TTGAAGATGGAAAAATTGTTAACTAG Protein sequence : MSILQVINLKKYYGQSSNITKALDGVTLSIEKGEFISIVGTSGSGKSTLLNMMGGLDNPTSGKVIIKGKELSTMSDEQLT IFRRRNIGFIFQNYNLVPLLNVYENIILPIGLDGETIDKDFINEIINMLSLEEKLYDMPSNLSGGQQQRVAIARALVTKP AIILADEPTGNLDSRTSSDVLSLLKVTSKKFNQTIVMITHNNEIAQLTDRIIRIEDGKIVN |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 8e-36 | 44 |
CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 9e-37 | 44 |
cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 9e-37 | 44 |
CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 9e-37 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
CD630_19610 | YP_001088467.1 | ABC transporter ATP-binding protein | CP001581.1.gene598.p | Protein | 1e-84 | 77 |
CD630_19610 | YP_001088467.1 | ABC transporter ATP-binding protein | CP001581.1.gene798.p | Protein | 2e-61 | 59 |
CD630_19610 | YP_001088467.1 | ABC transporter ATP-binding protein | NC_012469.1.7686878. | Protein | 1e-38 | 45 |