Gene Information

Name : CD630_19470 (CD630_19470)
Accession : YP_001088453.2
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 2243024 - 2243710 bp
Length : 687 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17135193, 11781802, 18504552, 18952792,8384683; Product type t : transporter

DNA sequence :
ATGAAAATTACACATAATAGTTTAGCTGTAGAAGCAAAAAATATTATCAAAGAATATAAAATTGGAAATACAACAACTCG
AGTGTTAAAAGAGGTATCTTTACAAGTAATGAAAGGTGAATTTGTTTCTATCATGGGTCAATCTGGTTCTGGTAAAAGTA
CTCTTTTATATATTTTAGGTGGTTTAGATACTCCAACGAGCGGAAAAGTGTATATGAATGGAGCTGATATATCACATTTT
AATGATGAGAAAATGAGCATAATACGTCGTAGAAATATAGGATTCGTGTTTCAATTTTATAACTTAATACCAAATTTAAA
TGTGGAGGAAAATATAATGCTTCCTTTGTTATTAGATGGTAAAAATTTAAAAGATTATAAAAATCAATTAGATGAAATCT
TAGATATAGTTGGTTTAACTGATAGACGTAAACATACACCACGAGAGTTATCTGGTGGTCAGCAACAACGTGTTGCTATA
GCTCGAGCTTTAATTGGAAAACCAGAGATTTTATTTGCTGATGAGCCTACTGGAAATTTAGATAGTAAAACAGGGATAGA
AATAATAGATTTACTGAATAAAATAAACAGAGACAATGGACAAACTATAATTATGGTAACTCACTCACCAGAAGCAGCCA
AAAGTAGTAGTCGTACTATTACAGTTTCAGATGGTTTAATTGTATAA

Protein sequence :
MKITHNSLAVEAKNIIKEYKIGNTTTRVLKEVSLQVMKGEFVSIMGQSGSGKSTLLYILGGLDTPTSGKVYMNGADISHF
NDEKMSIIRRRNIGFVFQFYNLIPNLNVEENIMLPLLLDGKNLKDYKNQLDEILDIVGLTDRRKHTPRELSGGQQQRVAI
ARALIGKPEILFADEPTGNLDSKTGIEIIDLLNKINRDNGQTIIMVTHSPEAAKSSSRTITVSDGLIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-40 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-41 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-41 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-41 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD630_19470 YP_001088453.2 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-54 54
CD630_19470 YP_001088453.2 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-46 51
CD630_19470 YP_001088453.2 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-48 50
CD630_19470 YP_001088453.2 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-39 45
CD630_19470 YP_001088453.2 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 8e-41 41