Gene Information

Name : CD630_18690 (CD630_18690)
Accession : YP_001088377.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : endonuclease relaxase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2170086 - 2171417 bp
Length : 1332 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type pe : putative enzyme

DNA sequence :
ATGGCTATTACAAAAATACATCCTATAAAATCAACCCTTAATCTCGCCATTTCATATATCGTTAATGGAGAAAAAACAGA
TGAGCAAATCTTAGTAAGCACTCATAAATGCCATCAGGAAACTGCTCATACCCAATTTTTAAGAACACGAAATGATGTCG
GAACAAACGGAACCGTTCTTGCAAGACACCTTATTCAATCCTTTTTACCCGGAGAAGCAAGTCCTGAAATGGCACATCAA
ATCGGTATGGAGCTATGTAAAAAGATATTAAAGGACGAATACGAATTTGTCTTATCTACCCACATAGATAAAGGGCATAT
CCACAACCATATTATCTTCAATAATGTAAATATGGTAACAGGAAAATGCTATCATTCCAACAAGAAAAGCTACCACCAAA
TCAGGTATCAAAGCGATAAGCTATGCAAAGAAAATAACCTTTCTGTGATTGATAAGTTCTACGAGAGCTATAAGAGAAAG
TACAAAACAAATGGTAAGCCATGGTATGAAAATGAGCAATCTAAGAAAGGTACTTCTTGGAAAAGCAAACTTCAATTTGA
CATTGATCGTCTGATAAAACAGTCTAAGGATTGGGAAGAATTTCTAAAGAAAATGGCGGAGCTTGGTTATGAAATAAAGT
ATGGAAAACATATAGCCTTTAAGCCAAAAGACAAACAGAGATTTACAAGAGCTAAGACGATTGGTGAGGACTATACAGAA
GAAAGATTAAAAGAGCGTATTACAGAAAATCAAACGATTAAAACCCCACCTGTCAAAAAACGAATCGGCAATGTTATTGA
CATGAATACCAATGTGAAAGTAAAGGAAAGCAAAGGATACGAATATTGGGCAACCAAACATAACCTTAATACAATGGCTG
AGTCTGTAATTTATATCAGAGAACATGGCATTAAATCCGTTAAACAGCTTGATGAGTACATCCAAAAAGTAGCCGACGAA
AGACAAAATTTACAGGATAAAATAAAGATTATTGATAAAGAAATGCAGGAGCTTTCTACCACTATGGAAAAAGTTCATAC
CGTTAAAAAATACAGGCAATACTACATGGAATATAAAGCAAATCCATCCGATAAGGCATTTTTTGAGGAGCATAAGGCTG
AAATCACACGCTATGAAACGGCTCTTGCAAAACTTAAAAAGTCCTATTCAAAGCTTCCTGATTCAAAGGGCATTTTAGAT
GAACTTGATAAATTGCAAGAAAAAAAGAATACCCTAATGCAAGAGTATTCTTCTACAAAATCTACTATGGACGAGCTTTA
TCAAATACGAAAGAACTATGGAATTTACATGGGTAAGGAGATGGAACGATAA

Protein sequence :
MAITKIHPIKSTLNLAISYIVNGEKTDEQILVSTHKCHQETAHTQFLRTRNDVGTNGTVLARHLIQSFLPGEASPEMAHQ
IGMELCKKILKDEYEFVLSTHIDKGHIHNHIIFNNVNMVTGKCYHSNKKSYHQIRYQSDKLCKENNLSVIDKFYESYKRK
YKTNGKPWYENEQSKKGTSWKSKLQFDIDRLIKQSKDWEEFLKKMAELGYEIKYGKHIAFKPKDKQRFTRAKTIGEDYTE
ERLKERITENQTIKTPPVKKRIGNVIDMNTNVKVKESKGYEYWATKHNLNTMAESVIYIREHGIKSVKQLDEYIQKVADE
RQNLQDKIKIIDKEMQELSTTMEKVHTVKKYRQYYMEYKANPSDKAFFEEHKAEITRYETALAKLKKSYSKLPDSKGILD
ELDKLQEKKNTLMQEYSSTKSTMDELYQIRKNYGIYMGKEMER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00726 YP_008394250.1 hypothetical protein Not tested Not named Protein 1e-65 42