Gene Information

Name : CD630_18640 (CD630_18640)
Accession : YP_001088372.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Resistance
Product : HTH-type transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3655
EC number : -
Position : 2165646 - 2165876 bp
Length : 231 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12568329, 12568327, 17650959, 11157942,11073898, 8863741,11839496, 11292341; Product type r : regulator

DNA sequence : 
ATGAGGGTTTTTAGTTATAAAAGATTGTTCAAAAAACTCATTGATTTAGATATGACAAATAATGAATTGATGGAAAAGGC
AAAAGTGAGTAAAAGTACATTTTACAAAATGAAGAATGGACAGAATGTAACTACGGATGTTTTGCTTAGAATTTGTAATG
CTTTGGATTGTGATATTGAAGATATTATGGAGTGCGTAATTATTGAAGATGTAAGGAGAATGGGAGTCTAA

Protein sequence : 
MRVFSYKRLFKKLIDLDMTNNELMEKAKVSKSTFYKMKNGQNVTTDVLLRICNALDCDIEDIMECVIIEDVRRMGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01461 YP_003783861.1 hypothetical protein Not tested PiCp 5 Protein 1e-07 41
CpC231_1455 YP_005683818.1 hypothetical protein Not tested PiCp 5 Protein 8e-08 41
CpI19_1462 YP_005685904.1 hypothetical protein Not tested PiCp 5 Protein 8e-08 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD630_18640 YP_001088372.1 HTH-type transcriptional regulator DQ212986.1.gene3.p01 Protein 1e-09 55