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Name : CD630_18490 (CD630_18490) Accession : YP_001088355.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : conjugative transfer protein Tn1549-like, CTn5-Orf5 Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 2140266 - 2142005 bp Length : 1740 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 11976307, 12568329,12568327, 20528466,17949300, 17650959, 17261630,16788196, 16565159, 11320127,11157942, 11073898,10850994, DNA sequence : GTGCAAGATAAGGCAAAGTTTCTAAAGCAGAACATTCCCTATCTTGCATTTTTCTATGTTGGCAATATCTTTTCTCATCA TGTAAGAGCATATACTGGTGGCGATGTAATAGACAAAATATTTCAAGGTATATTGGAACTTAACACCATGAGCTTTCTTC CAAGTTTTCATCCAACTGATATTCTAATAGGCGTAGGAGTAGCTACTTTAATCAAATTCATTGCCTATACAAAAGGGAAA AATGCGAAAAAGTTTAGGCAGGGAAAAGAGTATGGCTCGGCAAGATGGGGAACTAGAAAAGATATTGAGCCGTACATTGA TGAAAAGTTTCAAAACAATATCTTGCTAACGCAAACAGAACGATTAACTATGAATGGTAGACCGAAAAATCCCAAGTATG CAAGAAATAAAAATGTACTTGTCATAGGAGGATCTGGAAGTGGCAAGACAAGGTTTTATGTCAAGCCGAACCTAATGCAA ATGCACAGTAGCTATTGCGTAACAGATCCAAAGGGAACGATAGTCCTTGAGTGTGGCAAAATGCTTGAAGATAACGGATA TGAGATAAAAATCCTTAATACCATTAACTTTAAAAAGTCTATGAAATACAATCCATTCGCCTACCTCCGCAGTGAAAAAG ACATACTTAAATTGGTGCAGACAATCATTGCAAACACTAAGGGAGAGGGTGAAAAAGCGGGGGAAGATTTTTGGGTCAAA GCCGAAAAACTCTATTATACAGCTCTGATTGGATATATCTTCTATGAAGCTCCAAGGGAAGAAAAGAACTTTGCAACACT CCTTGATATGATAGACGCTTCAGAAGTTAGAGAAGATGATGAAACATATATGAATCCTATTGATAGGTTATTTGAAGCAT TGGAAAAGAAAGAACCTACGCACTTTGCAGTAAAGCAATATAAAAAATACAAACTTGCTGCCGGAAAAACAGCGAAATCT ATTCTTATCTCTTGTGGTGCAAGGCTTGCTCCATTTGATATTAGGGAACTTAGGGACTTGATGGGGGAAGATGAACTTGA GCTTGATACACTCGGAGATAGAAAAACGGCACTCTTTGTTATTATCTCTGATACAGATGATACCTTTAACTTTGTAGTGT CTATTATGTATTCGCAGTTATTTAATCTCTTATGTGATAAGGCAGATGATGTATATGGCGGACGATTACCTGTCCATGTG AGGTGTCTACTTGATGAGTTCGCTAATATCGGCTTAATTCCTAAGTTTGAGAAGTTAATTGCAACAATCCGTTCAAGAGA GATTTCAGCAAGTATAATACTTCAAGCACAATCTCAGTTAAAAGCAATCTACAAAGATAATGCAGATACAATTGTAGGTA ATTGTGATAGCACCTTGTTTCTTGGCGGGAAGGAAAAGACTACATTAAAAGAGCTTTCTGAAACACTTGGAAAGGAAACG ATAGACCTTTACAATACCTCGGAAACAAGAAGCAATCAAAAGAGCTTTGGATTGAATTATCAAAAGACAGGAAAGGAGCT AATGAGCCAAGATGAGATAACAGTAATGGACGGTGGAAAATGTATATTTCAGCTTAGAGGTGTTCGACCTTTTCTATCAG ATAAATACGATATTACAAAGCATAAGAATTACAAGCTCCTTGAGGACTATGACAAGAGGAATTTGTTTGATATAGAGAGC TACATTAAGCGTAAAGGGAAAGTGAAAATGAATAGACATACTGTAATTACAAGATTGTAA Protein sequence : MQDKAKFLKQNIPYLAFFYVGNIFSHHVRAYTGGDVIDKIFQGILELNTMSFLPSFHPTDILIGVGVATLIKFIAYTKGK NAKKFRQGKEYGSARWGTRKDIEPYIDEKFQNNILLTQTERLTMNGRPKNPKYARNKNVLVIGGSGSGKTRFYVKPNLMQ MHSSYCVTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYLRSEKDILKLVQTIIANTKGEGEKAGEDFWVK AEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNPIDRLFEALEKKEPTHFAVKQYKKYKLAAGKTAKS ILISCGARLAPFDIRELRDLMGEDELELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDVYGGRLPVHV RCLLDEFANIGLIPKFEKLIATIRSREISASIILQAQSQLKAIYKDNADTIVGNCDSTLFLGGKEKTTLKELSETLGKET IDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGGKCIFQLRGVRPFLSDKYDITKHKNYKLLEDYDKRNLFDIES YIKRKGKVKMNRHTVITRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00690 | YP_008394214.1 | TraG/TraD family protein | Not tested | Not named | Protein | 1e-142 | 70 |
| EF2328 | NP_815983.1 | TraG family protein | Not tested | Not named | Protein | 6e-176 | 65 |
