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Name : CD630_17530 (CD630_17530) Accession : YP_001088257.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : ABC transporter multidrug-family ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : 3.6.3.- Position : 2032005 - 2032850 bp Length : 846 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17135193, 11781802, 18504552, 18952792,8384683; Product type t : transporter DNA sequence : ATGATTAAAGTTGATGATTTATCATTTAGTTATACAGATAGAGATTTTTTACAAAATATTAACTTTGAAGTAGGAAAAGG GGAAATACTAGGATTTTTAGGACCATCAGGTGCAGGAAAATCTACATTACAAAAGATTCTAATTGGAATGATAACTAATT ATGGAGGAAGTGTCATTGTAAATGGAGTAGAGAGTAAAAGACACTCAAATAAATTTTATGAAAATATAGGAGTTGATTTT GAATTTCCTAGTTTATATGAAAAGTTGACTGCAATAGAAAATTTAAAATATTTTGGGTCTCTATATTCTAAAAAACTACT ATCTATTGATGAGTTATTAAAATCAGTAGGACTAGAAAATGAATCAAATAAAAGGGTATCTGAGTATTCAAAAGGTATGA AATCTCGATTAAATTTTATAAAAGCTTTATTACATAATCCAGATATTTTATTTTTAGATGAACCAACAAGTGGTCTTGAC CCATCAAATAGCAAGGTTATGAAAGATATAATTTTATCAGAAAAATCGAAAGGTAAGACTATTATTTTAACAACTCATAA CATGTTAGATGCAACAGAGCTTTGTGACAGAGTAGCGTTCATTGTAAATGGTAAAATATCTGCTTTAGATACACCACATA ATCTTATTATGTCAAAAGGAGCTATTAAAGTTAGATATACTTACTTTGATAATGGAGAAAAAACTTCTGAATGTTTTCTG AACAATACTGCTAATGATAAAAATTTGAATATGCTTATTGAGAAAAATAAACTTTTATCAATACATAGTAGTGAACCAAC ATTAAATGATATTTTTATTGAGATAACAGGGAGGAATTTACAATGA Protein sequence : MIKVDDLSFSYTDRDFLQNINFEVGKGEILGFLGPSGAGKSTLQKILIGMITNYGGSVIVNGVESKRHSNKFYENIGVDF EFPSLYEKLTAIENLKYFGSLYSKKLLSIDELLKSVGLENESNKRVSEYSKGMKSRLNFIKALLHNPDILFLDEPTSGLD PSNSKVMKDIILSEKSKGKTIILTTHNMLDATELCDRVAFIVNGKISALDTPHNLIMSKGAIKVRYTYFDNGEKTSECFL NNTANDKNLNMLIEKNKLLSIHSSEPTLNDIFIEITGRNLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 2e-28 | 43 |
