Gene Information

Name : CD630_16710 (CD630_16710)
Accession : YP_001088173.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Resistance
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1947076 - 1947801 bp
Length : 726 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 18689481, 18790863; Product type r : regulator

DNA sequence : 
ATGGAAAATCGTGTTTTAATAATAGATGATGAAGTAGAAATATTGAAGCTTTTAGAAACTGTCCTAAAAAAAGAGGGTCT
TAATAATATATATACTGCAAAAACTAAAAAAGAAGGATTAGAATTATTTAAAAGTATTAATCCTGATTTGATTGTATTGG
ATATTATGTTACCAGATGGCGAAGGTTATGATATTTGTAAAGAAATAAGAAAAACCTCCAATTCTCCAATAATATTTTTA
TCAGCTAAAACCGAAGAATTAGATAAGTTACTTGGACTAGCGATTGGAGGAGATGATTATGTTACAAAACCTTTTAGCCC
TAAGGAAGTGGCTTTTAGAGTTAAAGCGCATTTGAGAAGATTAAGTTATTTTAGTGATGCTCAAAACGAAAGTAAAAATC
TAAATAATAATGAAGAAAAAATTATATCATTTGGCCCATATATATTAAATGAAAGTAGGGCAGAACTTATAAAAGATGGA
AAATCTATAGGACTGTCTGCAAAGGAACTAAAAATCCTATCTTTATTTGCACATAATCAAAATCAAATTATAAGTAAAGA
AAAACTATGGGATAAAGTGTGGGGAGAAGATTATGTTGGATTTGACAATACTATAATGGTTCATATAAGAAAAATTAGGG
AAAAATTAGAGGATAATCCTTCAAAACCTGAATATATTCTGACAATAAAAGGTCTTGGATATAAATTAGCAGTAAAGGAA
GATTAG

Protein sequence : 
MENRVLIIDDEVEILKLLETVLKKEGLNNIYTAKTKKEGLELFKSINPDLIVLDIMLPDGEGYDICKEIRKTSNSPIIFL
SAKTEELDKLLGLAIGGDDYVTKPFSPKEVAFRVKAHLRRLSYFSDAQNESKNLNNNEEKIISFGPYILNESRAELIKDG
KSIGLSAKELKILSLFAHNQNQIISKEKLWDKVWGEDYVGFDNTIMVHIRKIREKLEDNPSKPEYILTIKGLGYKLAVKE
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 1e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD630_16710 YP_001088173.1 two-component response regulator NC_012469.1.7685629. Protein 1e-35 42
CD630_16710 YP_001088173.1 two-component response regulator AM180355.1.gene1830. Protein 2e-37 41
CD630_16710 YP_001088173.1 two-component response regulator NC_012469.1.7686381. Protein 4e-36 41
CD630_16710 YP_001088173.1 two-component response regulator FJ349556.1.orf0.gene Protein 1e-36 41