|
Name : CD630_16530 (CD630_16530) Accession : YP_001088154.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : D-methionine-binding lipoprotein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1916589 - 1917386 bp Length : 798 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 17189357, 15610013,15215334; Product type lp : lipoprotein DNA sequence : ATGAAATTCAAAAAATTATTATGTTTGTTATTATGTCTAGTATTAACTTTAGCTGTGGTTGGATGTTCTAAAGCTAAAGA TGATAAAAAAATTGTTGTTGGTGCTACTTTAGTTCCAGGAGGAGAGTTATTAGAAGAATTAAAACCACTTATTAAAGAAA AAGGATATACTTTAGAAGTTAAAAACTTTGATGATTACATACTTCCAAACGAAGCTTTAAATAATGGTGAAATTGATGCA AATCTATTTCAACATGAACCTTATCTAAAAGAAGCTGTTAAGGCCAAAGGTTACAAAATAATGGCTGGTAAAAAACTATA TGTATGCCCAGCAATACTTTACTCTTATAAGATAAAATCTGTTGATGAATTTAAAAAAGGAGATACAATTGCAATAAGCA ATAACCCATCTTCTTGTTCTAAGAACCTTAGATACCTTGAAAGTATTGGACTTTTAACGTTACCTAAAGGGGATGGATTA GTTAGTCCTAAGGACATAATAGAAAATCCAAAGGGAATACAATTCAAAGAGTTAGATATTGCTCAAATTCCATCTTCTCT TCCAGATGTGACTGCTGCATTTATAGATACTACTTATGCTGTACCTGCTGGTCTTGATGCCAAGAAAAACGGAATTTATA CAGCTCCTATAAATGACGAGTATGCAAATCTTTTAGCATTTAGAACTGAAGATAAAGACAGTGAAAAGATTAAAGTTCTA CAAGATGTTCTTACATCAGATAAAGCAAGAAGCTTAATTGAAGAAAAATACAAAGGTATTGTGATTCCTACTTTTTAG Protein sequence : MKFKKLLCLLLCLVLTLAVVGCSKAKDDKKIVVGATLVPGGELLEELKPLIKEKGYTLEVKNFDDYILPNEALNNGEIDA NLFQHEPYLKEAVKAKGYKIMAGKKLYVCPAILYSYKIKSVDEFKKGDTIAISNNPSSCSKNLRYLESIGLLTLPKGDGL VSPKDIIENPKGIQFKELDIAQIPSSLPDVTAAFIDTTYAVPAGLDAKKNGIYTAPINDEYANLLAFRTEDKDSEKIKVL QDVLTSDKARSLIEEKYKGIVIPTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 7e-32 | 42 |
