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Name : serS1 (CD630_00140) Accession : YP_001086477.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : seryl-tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 17952 - 19223 bp Length : 1272 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9851985, 7540217; Product type e : enzyme DNA sequence : ATGTTAGATATTAAAAGAATAAGAGAAAATCTAGATGATATCAAAAAAGCTATGGAAAGAAGAGGTGAAAGAGAATTTGA CCTTGATGCTGTAGTGGAATTAGATAATAAAAGAAGAGAAATACTTCAAGAAGTTGAAGTTATGAAAAATGAGTTAAATG TAAATTCTAAAAAAATACCTCAATTAATAAAAGAAGGAAAAGATGTAACAGAAGAAAAGGCAAGATTGAAAGAGTTATCA GATAAGATAAAAGGTATTGATGAGAAAGTAAAAGAAGTAGAAGCAAAAATGGAATATACATTAATGAGAATACCAAATGT TCCTCATCCAGAGGTACCACAAGGTGAAACAGATGAAGACAATGTTCAAATAAGAACTTGGGGAGAACCTACTAAATTTG ATTTTGAGCATAAAGCGCATTGGGATATAGGTACAGGTCTAGGTATTTTAGATTTTGAAAGAGCAGGGAAAATAACTGGG TCAAGGTTTACTTTATATAGGGGATTAGGAGCTAGATTAGAAAGATCTTTAATGAATTTCTTTTTAAATACTCATACAGC TAAGCATGGCTATACGGAAGTCTTACCTCCATTTATGGCCAATAGAAATAGTTTTATAGGGACTGGTCAACTTCCTAAAT TTGAAGAAGATATGTTTAAAATAGAAGGATTAGAGTATTTCTTAATACCAACAGCTGAAGTTCCTGTTACTAATATACAT GCTAATGAAATATTAGATGTTGCAGAGCTTCCAATTAAATACTGTGCATATACTCCTTGTTTTAGATCTGAAGCAGGTTC AGCAGGAAGAGATACAAGAGGTTTAGTTAGACAACATCAATTTAATAAAGTTGAATTAGTTAAATTTGTTAAACCAGAAG ATTCTTATAATGAATTAGAATCATTAACTCATGATGCTGAAACTATGTTACAAATGTTAGGTCTTCCATATAGAGTTGTA AAAATATGTACAGGAGATTTGGGATTTACAGCTGCATTTAAATATGATTTAGAAGTTTGGATGCCAAGCTACAATAGATA TGTAGAAATATCTTCTTGTTCAAATTTTGAAGATTTCCAAGCAAGAAGAGCAGGAATAAGATTTAAAAGGGATAAAAAAT CAAAAGCAGAATATGTTCATACATTAAATGGTTCTGGATTAGCGATAGGAAGATGTTTGGCTGCTATATTAGAAAATTAT CAGCAGGCAGATGGTTCTGTAGTAGTTCCAGAAGAATTAAGACCTTATATGGGTGTTGATGTTATAAAATAA Protein sequence : MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIPQLIKEGKDVTEEKARLKELS DKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEVPQGETDEDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITG SRFTLYRGLGARLERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKIEGLEYFLIPTAEVPVTNIH ANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYNELESLTHDAETMLQMLGLPYRVV KICTGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNFEDFQARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRCLAAILENY QQADGSVVVPEELRPYMGVDVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-115 | 57 |
