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Name : kdpB (CD630_15920) Accession : YP_001088093.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 1846713 - 1848770 bp Length : 2058 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 18058005, 17710642, 17536175, 16645309,14604015, 1288322,9858692; Product type t : transporter DNA sequence : ATGGAAACTAAAAAAACAAAGTTTATTACAAAAGATATTTTCAAAACTTCCATTATAGAAGCTTTTAAAAAATTAAATCC TAAATACATGATGAAAAATCCAGTTATGTTTGTTGTAGAAATTGGATTTATAGTAACATTGATACTTACAATAGTACCTA GTTTGTTTGGTGATGAAGGCAATAACTTAAGAGCTTATAATGGGATTGTAACAATAATCTTATTTATAACAGTCCTTTTT GCAAATTTTGCTGAAGCTGTAGCTGAAGGAAGAGGTAAAGCTCAAGCAGATACACTTAAGAAAACTAGAAAAGATACAGT AGCAAGGGTTATAGATACGTTAGGAAATGAAAAAATGATAAGTGCAAGTGAGCTAAAACTTGGTGATATTGTTTTAGTAA ATGCTGGAGAAGTTATTCCAAATGATGGAGAAGTTATAGAGGGTATAGCTTCTGTGGATGAGTCAGCAATAACTGGAGAA TCTGCACCTGTCATGAGAGAATCAGGTGGAGATTTCGCATCTGTTACAGGTGGTACTACAGTTGTAAGTGACTGGTTAAA GATAAGAATAACAACAAAACCAGGAGAATCGTTCTTAGATAAAATGATAGCTCTTGTAGAAGGTGCTTCAAGACAAAAAA CGCCAAATGAGATTGCTTTAAATACTTTATTAGTAGGGTTAACACTTATATTTATGGTTGTTTTAATATCTCTTTATCCA ATGGCAAACTATGCAGGTGTAAAGATTCCAATTTCTACTATGATAGCTCTTTTGGTATGTTTAATACCAACTACTATAGG TGGATTGTTGTCAGCTATTGGTATTGCAGGTATGGATAGAGTAACTAGATTTAATGTAATTGCAATGTCAGGAAAAGCAG TAGAAGCTTGTGGAGACGTTGATACTATGATTTTGGATAAGACAGGTACGATTACTTATGGGAATAGACTTGCATCAGAA TTTATAGCAGTTGGAAATGCAGATTCAAAAGATTTAATAAATTATTCTGTTATGTGTTCATTAAAAGATGATACACCAGA AGGAAAATCTATAGTTGATTTAGGTATGAAATTAGGTTCAACAGGTAAGACAAAAGAGGCAGAGGAAGCTGAGTTTGTAG AATTTTCTGCACAAACTAGAATGAGTGGTATTAACTTAGCTGATGGTAGAGCTATAAGAAAAGGTGCTTATGATAGCATA ATAAAAAGAGTAAAAGAATCTGGTGGTACAGTGCCAGAAGATTTAGAAGAAAATGTAAATCGAGTAGCTAAACTAGGAGG AACACCTTTAGTAGTGTGTGTAGATAATGAGATATATGGAATTATCTACTTAAAAGATACAGTAAAATCAGGGCTTGTAG AAAGATTTGCTAGACTTCGAGAGATAGGAATAAAGACAATAATGTGTACAGGGGATAATCCCTTGACAGCAGCTACAATT GCAAGAGAAGCTGGAGTAGATGGATTTATTGCAGAATGTAAACCAGAAGATAAAATAGATGCAATAAAAAAAGAACAATT AGAGGGTAAAATAGTTGCAATGACAGGTGATGGAACAAATGATGCTCCTGCACTTGCTCAGGCAGATGTAGGTCTTGCAA TGAATAGTGGTACAACATCTGCAAAAGAAGCAGCAAATATGGTAGATTTAGATTCAGACCCAACTAAGATATTGGAAGTT GTTGAAATAGGAAAACAGCTTTTAATAACTCGTGGGGCTTTGACAACATTTAGTATAGCAAATGATGTTGCAAAATATTT TGCGATTATACCAGCTATATTTACTCTTGCAATACCTCAAATGGAGATATTAAATGTAATGAAACTTTCTACGTCATTTA GTGCGATATTATCAGCTTTAATATTTAATGCTATAATTATCCCATGTTTAATACCTCTTGCAATGAAGGGAGTAAAATAT AGACCTATGAAATCACAAGCTATGTTAATGAGAAATATGCTTATATTTGGTCTTGGTGGAGTTATAGTACCATTTTTAGG AATAAAATTAATTGATTTATTGATTACACCTTTAGTAATGGTTCTTAATTTAGGTTAA Protein sequence : METKKTKFITKDIFKTSIIEAFKKLNPKYMMKNPVMFVVEIGFIVTLILTIVPSLFGDEGNNLRAYNGIVTIILFITVLF ANFAEAVAEGRGKAQADTLKKTRKDTVARVIDTLGNEKMISASELKLGDIVLVNAGEVIPNDGEVIEGIASVDESAITGE SAPVMRESGGDFASVTGGTTVVSDWLKIRITTKPGESFLDKMIALVEGASRQKTPNEIALNTLLVGLTLIFMVVLISLYP MANYAGVKIPISTMIALLVCLIPTTIGGLLSAIGIAGMDRVTRFNVIAMSGKAVEACGDVDTMILDKTGTITYGNRLASE FIAVGNADSKDLINYSVMCSLKDDTPEGKSIVDLGMKLGSTGKTKEAEEAEFVEFSAQTRMSGINLADGRAIRKGAYDSI IKRVKESGGTVPEDLEENVNRVAKLGGTPLVVCVDNEIYGIIYLKDTVKSGLVERFARLREIGIKTIMCTGDNPLTAATI AREAGVDGFIAECKPEDKIDAIKKEQLEGKIVAMTGDGTNDAPALAQADVGLAMNSGTTSAKEAANMVDLDSDPTKILEV VEIGKQLLITRGALTTFSIANDVAKYFAIIPAIFTLAIPQMEILNVMKLSTSFSAILSALIFNAIIIPCLIPLAMKGVKY RPMKSQAMLMRNMLIFGLGGVIVPFLGIKLIDLLITPLVMVLNLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-180 | 64 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-179 | 64 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-179 | 64 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-179 | 64 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-179 | 64 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-179 | 64 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-150 | 57 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-150 | 57 |
