Gene Information

Name : kdpA (CD630_15910)
Accession : YP_001088092.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : 3.6.3.12
Position : 1844994 - 1846688 bp
Length : 1695 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 18058005, 17710642, 17536175, 16645309,14604015, 1288322,9858692; Product type t : transporter

DNA sequence :
TTGGGGGGAACAATTTTTATGGTGCAGATAGTAATAGTGTTAGCGATTTTTATGATTTTAGTAATACCTATGGGCAAGTA
TTTATATCATATAGCTACTAATCAAAAAACATTTGGAGATAGACTATTTGATAAAGTGGACAATTTTATATATAAGGTAT
GTAGTATAGATAAGAAAAAAGAAATGAACTGGAAACAGTATGCATTAGCTTTATTATTTACAAATGCAGTTATGGTATTT
ATAGGATATATCATACTTAGAACTCAAAGTATGCATATTTTTAATCCAAGTGGAATTAAAAGTATGGAACAAGGACTATC
ATTTAATACAATAATAAGTTTTATGACAAATACAAATCTTCAACATTATTCAGGTGAATCAGGACTTTCATACTTTAGTC
AGATGACAGTGATAATATATATGATGTTTACATCAGCTGCAACAGGATATGCGGCTGCTATGGCATTTGTAAGAGGTCTA
GTCGGTAAAAAGAAAACATTGGGAAATTTTTATGTAGATTTAATTAGGATAACAACAAGAGTACTTTTACCAGGAGCTTT
AATTATTGGGCTTATATTAGTTACACAAGGAGTACCACAAACTTTTGCTGGGACAGAAACAGTGACTACTATAGAAGGAA
AGCTTCAAGATATAGCTAGAGGTCCTGTGGCAGCTCTTGAATCAATAAAACATTTAGGAACAAATGGTGGTGGATTCTTT
GGTTCAAATTCATCACACCCATTTGAAAATCCAACAATAATATCAAATATAGTAGAAATATTATCTATGATGATATTACC
AGGAGCTTGTGTTGTTGCATTTGGTCACATGATAAAGAATAAAAAACAAGGTTGGGTTGTGTTTGGCGCAATGTCAATCA
TATTTTTAATAGGTCTAGTAGTGTGCTTTAAAGCAGAAAGTGCAGGAAATCCTATTTTATCACAATTAGGGCTTAATCAA
AGTATGGGAAGTATGGAAGGTAAGGAAGTTAGATTTGGTATAGCACAATCATCATTATTCACAACAGTGACTACTTCCTT
TACGACAGGTACAGTTAATAATATGCATGATACACTGACTCCTTTAGGAGGATTAGTACCACTTTTAAATATGATGCTAA
ATGTAGTATTTGGTGGTAAAGGCGTAGGTCTGATGAATATGTTGATGTACGCTATAATAGCAGTATTCTTATGTGGATTA
ATGGTAGGAAGAACACCAGAGTTTTTAACTAAGAAAATCGAAGGAAAAGAAATGAAGCTTATTGCTTTACTTATTATATT
ACATCCACTTTTAATACTAATGTTCTCTGGTCTTTCAGTAGCAATACCAGCAGGGCTTGAAGGAATTTCAAATCCTGGAT
TCCATGGATTATCACAGGTATTGTATGAGTTTGCATCTTCAGCAGCCAATAATGGTTCAGGATTTGAAGGTCTAGGAGAT
AACACTATGTTTTGGAATATAACAACAGGTGTAGTTATGTTCTTTGGAAGATATGTGTCTATTATAGTACTACTAGCAAT
ATCAAGTTTGTTAGCATCTAAAAAAGCTGTAAATGAAAGTATAGGAACACTTAGAACGGATAATTTTACATTTACAATAG
TTTTAGTACTTGTTGTTTTAATTGTTGGTGCTTTAACATTTTTCCCAGCCTTAGCGCTTGGACCTATTTCGGAGCATCTA
GTGTTGTGGCACTAA

Protein sequence :
MGGTIFMVQIVIVLAIFMILVIPMGKYLYHIATNQKTFGDRLFDKVDNFIYKVCSIDKKKEMNWKQYALALLFTNAVMVF
IGYIILRTQSMHIFNPSGIKSMEQGLSFNTIISFMTNTNLQHYSGESGLSYFSQMTVIIYMMFTSAATGYAAAMAFVRGL
VGKKKTLGNFYVDLIRITTRVLLPGALIIGLILVTQGVPQTFAGTETVTTIEGKLQDIARGPVAALESIKHLGTNGGGFF
GSNSSHPFENPTIISNIVEILSMMILPGACVVAFGHMIKNKKQGWVVFGAMSIIFLIGLVVCFKAESAGNPILSQLGLNQ
SMGSMEGKEVRFGIAQSSLFTTVTTSFTTGTVNNMHDTLTPLGGLVPLLNMMLNVVFGGKGVGLMNMLMYAIIAVFLCGL
MVGRTPEFLTKKIEGKEMKLIALLIILHPLLILMFSGLSVAIPAGLEGISNPGFHGLSQVLYEFASSAANNGSGFEGLGD
NTMFWNITTGVVMFFGRYVSIIVLLAISSLLASKKAVNESIGTLRTDNFTFTIVLVLVVLIVGALTFFPALALGPISEHL
VLWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-88 52
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 2e-88 52
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 2e-88 52
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-88 52
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-88 52
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-88 52