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Name : metQ (CD630_14910) Accession : YP_001087992.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : ABC transporter methionine-specific substrate-binding lipoprotein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1726001 - 1726792 bp Length : 792 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12169620, 12218041, 12819857, 17135193,11781802,18504552, 18952792, 8384683; Product type t : transporter DNA sequence : ATGAAATTAAAGAAATTATTATCAGTAGCATTGGTGTCAGCAATAGCAATATCAGCAGTAGGTTGTTCAAACAAAGAGGA TAAAAAAATACTAGTAGGAGCTTCATCAAATCCACATGCAAAGATATTGGAAGTTGCAAAACCTTTGTTAAAAGAAAAAG GATATGATTTAGAAGTAAAAATATTTGATGATTATGTACTTCCAAATACAGCTTTAGATGAAGGGTCTTTGGATGCTAAC TTCTTTCAACATATTCCATTTTTAGAGGAAACTGTGAAGGAGAAAGGATATAAACTTACTTATACATCTAAAGTTCATAT AGAGCCAATGGGATTCTATTCAGAAAAAGTTAAGTCATTAGATGAATTAAAAGATGGAGCTGTTATAGCTGTGCCAAATG ATGCAACTAATGGAGCTAGAGCACTTAAATTATTAGCAAAAAATAAATTGATAGAAGTAAAAGATGGAGAGCTTATAACT AAAAAAGATATAACTAAAAATCCTAAAAATATAGTAATAAAAGAAATGAATGCAGAGCAATTACCAACAGTATTAAAAGA TGTTGACGGAGCAGTAATAAATTCTAATTATGCTTTAACAGCTAACTTAAATCCTACTAAGGATGCAATAGTAATAGAAT CAAGTGATTCTCCATATGTAAATATAATAGCTTGTAGAGAAAATAATAAAGATAGTGATAAGATTAAGGCTTTATCAGAG GCTATGAATAGTAAAGAAGTTAAAAAATTTATACAAGATGAATATAAAGGAAGTATAGTTCCAGCTTTTTAA Protein sequence : MKLKKLLSVALVSAIAISAVGCSNKEDKKILVGASSNPHAKILEVAKPLLKEKGYDLEVKIFDDYVLPNTALDEGSLDAN FFQHIPFLEETVKEKGYKLTYTSKVHIEPMGFYSEKVKSLDELKDGAVIAVPNDATNGARALKLLAKNKLIEVKDGELIT KKDITKNPKNIVIKEMNAEQLPTVLKDVDGAVINSNYALTANLNPTKDAIVIESSDSPYVNIIACRENNKDSDKIKALSE AMNSKEVKKFIQDEYKGSIVPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 8e-44 | 47 |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 2e-36 | 43 |
