Gene Information

Name : metN (CD630_14890)
Accession : YP_001087990.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Resistance
Product : ABC transporter methionine-specific ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1135
EC number : 3.6.3.-
Position : 1724351 - 1725316 bp
Length : 966 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12169620, 12218041, 12819857, 17135193,11781802,18504552, 18952792, 8384683; Product type t : transporter

DNA sequence :
ATGATTAGCATAAAAAATGTTAATAAGTATTATGGAAAGATTCAAGTGCTTAAAGATGTAAGTATTGAAATAGAATCTGG
AGAAATTTTTGGAATAATAGGTCATAGTGGTGCAGGGAAATCAACACTACTGAGATGTATAAACGGATTAGAAGAATACC
AAGAAGGCAGTGTACTTGTTTCTGATAAAGAAGTAAAGTCATTGAATGAAAAGCAAATGAGAGATTTAAGAAAAGAGTTA
GGAATGATTTTTCAACACTTTTCATTGCTTGAAAGAAAAACTGTATTTGATAATGTAGCATTGCCATTAGAATGTTTTGG
ATACTCAAAGGCAGAAATTAAAAAAAGAGTTTTAGAGTTATTAGAAGTAGTTGGAATATCTGAAAAGAAAAATGATAAAC
CCAGAAATCTAAGTGGCGGACAAAAACAAAGGGTTGCAATTGCTAGAGCTTTAGCACTAAATCCACAAGTACTTCTTTGT
GATGAAGCAACTTCAGCATTAGACCCAAATACTACAAAGTCAATTCTTTCATTGCTTGAAGATATAAATAAAAAATTGGG
AATAACAATAATAGTTGTAACTCATCAAATGGAAGTTATAAAGCAGATTTGTGGAAGAGTAGCAATAATGGAAAATGGAG
AAGTATTAGAGGTAGGAGATACAGAAGAAATATTCTTAAGAAATACTAAAGGACTTAGAAAATTAATAGGTGAAGAAAGT
ATAATATTGCCAAAAGGAACAAATATAAAGATACTATTCCCTAAAGATATTTCTAATGAAGCTATTATTACAACTATGGC
AAGAGAACTAAATATAGATGTGTCTATAATATTTGGGAAATTAGAACAATTTAAAGATGATATTTTAGGTTCACTTATTA
TAAACATTTCAGATAAAAGTGGAGAGCAAGTAAAACAATATCTAACTAGTAAAGGCATAAGATGGGAGGAAATGATAAAT
GAATAG

Protein sequence :
MISIKNVNKYYGKIQVLKDVSIEIESGEIFGIIGHSGAGKSTLLRCINGLEEYQEGSVLVSDKEVKSLNEKQMRDLRKEL
GMIFQHFSLLERKTVFDNVALPLECFGYSKAEIKKRVLELLEVVGISEKKNDKPRNLSGGQKQRVAIARALALNPQVLLC
DEATSALDPNTTKSILSLLEDINKKLGITIIVVTHQMEVIKQICGRVAIMENGEVLEVGDTEEIFLRNTKGLRKLIGEES
IILPKGTNIKILFPKDISNEAIITTMARELNIDVSIIFGKLEQFKDDILGSLIINISDKSGEQVKQYLTSKGIRWEEMIN
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-52 44
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 1e-51 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metN YP_001087990.1 ABC transporter methionine-specific ATP-binding protein NC_012469.1.7686878. Protein 5e-26 41