|
Name : CD630_13490 (CD630_13490) Accession : YP_001087845.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Virulence Product : ABC transporter lantibiotic/multidrug-family ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : 3.6.3.- Position : 1565752 - 1566459 bp Length : 708 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17577060, 17046525, 17096664, 18336322,17135193,11781802, 18504552, 18952792, 8384683; Product type t : transporter DNA sequence : ATGAGTAATTATATTTTGCAGGTAAAAGGAGTTTCTAAAAAATTTAAGGAGCAGATGGCAGTTGATAACATTTCACTAGC AATTAAATCTAATTCTATATATGGATTATTAGGACCAAATGGAGCTGGGAAATCTACTTTATTAAAAATGATAACTGGGA TTTTAAATCCAACTTCAGGAAAAATAATGTTTGAGGGACATAGATGGACTAGAAAGGATTTATCAAATATTGGTTCTCTT ATTGAGTCTCCTGCTATATATGAGAATTTAACAGCACGAGAAAATTTAAAAGTCCATACTACTTTACTTGGTCTTCCTGA CTCTCGCATTGAAGAAGTTTTAGAGACTGTAGATTTAAGAGATACCTTTAAAAAGCGTTCAGGTCAATTCTCTCTAGGCA TGAAGCAACGCCTTGGTATTGCTATTGCATTATTAAATCACCCAAAACTTTTAATCTTAGATGAGCCTACAAATGGTCTT GACCCTATTGGTATTGAAGAACTTAGAGAATTGATTCGTTCTTTTCCAAAACAAGGAATTACAGTTATTTTATCAAGCCA TATCTTGTCTGAAGTTGAACAAGTTGTAGATGAAATAGGAATAATTTCTAATGGAGTAATGGGTTATCAAGGAGAAGTAT CAAAAGAACAAAACTTAGAAAAACTTTTTATGAAAGTTGTAGCTGAAAATAGAAAGAGAGGGGAGTAA Protein sequence : MSNYILQVKGVSKKFKEQMAVDNISLAIKSNSIYGLLGPNGAGKSTLLKMITGILNPTSGKIMFEGHRWTRKDLSNIGSL IESPAIYENLTARENLKVHTTLLGLPDSRIEEVLETVDLRDTFKKRSGQFSLGMKQRLGIAIALLNHPKLLILDEPTNGL DPIGIEELRELIRSFPKQGITVILSSHILSEVEQVVDEIGIISNGVMGYQGEVSKEQNLEKLFMKVVAENRKRGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epiF | YP_186701.1 | epidermin immunity protein F | Virulence | vSa¥â | Protein | 3e-43 | 50 |
| bsaF | NP_646577.1 | hypothetical protein | Not tested | vSa¥â | Protein | 3e-43 | 50 |
| epiF | YP_494453.1 | lantibiotic epidermin immunity protein F | Not tested | vSa¥â | Protein | 3e-43 | 50 |
| bsaF | YP_001332745.1 | lantibiotic immunity protein F | Not tested | vSa¥â | Protein | 4e-43 | 50 |
| sboF | YP_006309913.1 | SboF | Not tested | FWisland_1 | Protein | 9e-44 | 50 |
| cdd4 | CAA63569.1 | - | Not tested | PaLoc | Protein | 9e-45 | 50 |
| SPN23F_09830 | YP_002510959.1 | lantibiotic transport ATP-binding protein | Not tested | PPI-1 | Protein | 2e-33 | 45 |
| CD241_0087 | YP_005124356.1 | ABC transporter ATP-binding protein | Not tested | Not named | Protein | 1e-40 | 43 |
| DIP0090 | NP_938487.1 | ABC transporter ATP-binding protein | Not tested | Not named | Protein | 1e-40 | 43 |
