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Name : pdp (CD630_12250) Accession : YP_001087718.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 1422867 - 1424207 bp Length : 1341 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8987664, 10074062, 16469506; Product type e : enzyme DNA sequence : ATGGAGATTTCAATTATGAGAATGTATGATATTATAAAAAAAAAGAGAGATAACCTAGAGCTTAGTAAAAAAGAGATAAA CTACTTTATAGAAAACTATTCAAAGGGAGATATACCTGACTATCAAGCTTCTGCACTATTAATGTCGATTTACTTAAATA AGATGAATAAACAGGAAACTGTACATCTTACAGAAGCAATGATGAACTCTGGAGACATGATAAACCTATCTGAGATAGAT GGAATAAAGGTAGATAAGCATAGTACTGGTGGTGTTGGAGATAAGACTACCATAGCTCTTATACCTTTGGTTGCTTCATG TGGAGCACCAGTTGCAAAGATGTCAGGTAGAGGTCTTGGTCATACTGGTGGTACTATTGATAAATTGGAGTCTATACCAG GTTTTTCGACAGAAATGGAGATAAGTAAATTTATTGATTCTGTAAATAAGTCTAAAATAGCAGTTTGTGGTCAAAGTGCA AAGGTAGCAATTGCAGATAAGAAAATATATGCTCTTAGAGATGTTACAGCAACTGTTGATAATATATCATTGATATCATC AAGTGTAATGTCTAAAAAGTTAGCTTCAGGAGCTGATGCAATTGTGCTAGATGTAAAAACTGGTGATGGAGCATTTATGA AGACATTAGAAGAGTCTTTTGAGTTAGCTAAATCTATGGTTGATATAGGTACTGGTATGAATAGAGATACAATAGGGATT GTAACAGATATGGATGAACCTTTAGGTTTTGCAGTGGGAAACTCTTTAGAAGTTATAGAGGCAATTGAGACATTAAAAGG AAATGGACCTAAAGACCTTGTTGAGCTATGCGAAGTATTAGGAGCATATATGTTGGTTTTATCAAAGGTAGCACATGATT TTGAAGATGGTGTTGAAAAAATAAGAGAATCAATAAAATCTGGTACTGCTATACAAAAACTCAAAGAGTTTATAGAGAAT CAAGGTGGTAATAAAGATGTAGTAGATGATTATTCTTTATTCAAAAAATCAAAGTATAAATATCCAGTTAAATCAACTAA ATCAGGTTATATAAGTAAAATTAAAGCTGAAGATGTTGGTGTATCGGCTATGATTCTTGGAGCAGGTAGAGAAACTAAAG ATGATATTTTAGATTTATCAGCAGGGATAATTTTAGAAAAGAAAGTAGGAGATTATGTAAATGAAGGTGAAGTTTTAGCT TACATGTATTATAATGATGAACAAAAGCTTTCATTGGCAAAGGGAAGATTTATTGATTCCTACTCTATTGTAGATTCAAA AATAGAAAAAAATAAATTAATATATGGTATTGTAACTAAAGAAGAGATTAAAAAGTTTTAG Protein sequence : MEISIMRMYDIIKKKRDNLELSKKEINYFIENYSKGDIPDYQASALLMSIYLNKMNKQETVHLTEAMMNSGDMINLSEID GIKVDKHSTGGVGDKTTIALIPLVASCGAPVAKMSGRGLGHTGGTIDKLESIPGFSTEMEISKFIDSVNKSKIAVCGQSA KVAIADKKIYALRDVTATVDNISLISSSVMSKKLASGADAIVLDVKTGDGAFMKTLEESFELAKSMVDIGTGMNRDTIGI VTDMDEPLGFAVGNSLEVIEAIETLKGNGPKDLVELCEVLGAYMLVLSKVAHDFEDGVEKIRESIKSGTAIQKLKEFIEN QGGNKDVVDDYSLFKKSKYKYPVKSTKSGYISKIKAEDVGVSAMILGAGRETKDDILDLSAGIILEKKVGDYVNEGEVLA YMYYNDEQKLSLAKGRFIDSYSIVDSKIEKNKLIYGIVTKEEIKKF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-75 | 43 |
