Gene Information

Name : CD630_11180 (CD630_11180)
Accession : YP_001087607.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : conjugative transposon protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1313507 - 1314481 bp
Length : 975 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type h : extrachromosomal origin

DNA sequence :
ATGGCAGTTTTCCGCGTGGAAAAGAATAAAGGTTATACGGTTATGAGCAACCACCATTTACGAAACAAGGAGCTTTCCTT
AAAAGCAAAGGGCTTGTTGTCGCAAATGCTTTCACTTCCCGAAGATTGGGACTATACCCTTGCAGGGCTGTCCCTTATCA
ACCGGGAAAGTATCGACGCTATCCGCACCGCTGTATGGGAGCTTGAAAAAGCCGGATATATCACAAGGCGGCAGGGACGC
GACGAGAAAGGCAAAATGACCGCTATCGAGTACACCATTTACGAGCAGCCACAGCCCCCGACATTGGATTGTCCGGTATT
GGAAAATCCAACAGCGGATAAGCCGATATTGGAAAATCCGACACCGGATAACCCGACATCGGAAAATCCAACGCAATTAA
ATAAAGAACTATTAAAGACTAACTTACCAAAAAAAGAAAAATTAAATACAGATATATCAAATACCCATTCCATTCCTTTC
CATTCCCTAAATCCCTCTCCTTTAGAGGACGCGGCACAGCCGCCGGAACGGAAGCGAAAGGAAACGACAGACGCATACCG
AGTGTATGAGGAAATTATCAAGGACAATATCGAGTATGAGCATTTCATCAAGCACACTGATTTTGAGAAAGAACGCTTAG
ACGAGATTGTGTCCCTTATCCTTGAAACGGTCTGCACCAAACGAAAGACTATCCGTATCGCCGGGGACGATTATCCGGCA
GAGCTTGTGAAAGCAAAGTTTATGAAGCTGAACAGCAGTCATATTGAGTTTGTTTTTGCCTGTATGAGTGAGAACACCAC
CAAAATCCGCAACATCAAGCAATATCTGAAAGCGGTACTGTTCAATGCCCCAAACACCATTGATAGCTATTACACCGCCC
TAGTCAATCACGATATGTACGGCGGGCGTACTATCCAGTCGGCAAGAAGCAAGGGCATACCCGATTACACCTACAATGAG
GGCGAAAGCCTGTAA

Protein sequence :
MAVFRVEKNKGYTVMSNHHLRNKELSLKAKGLLSQMLSLPEDWDYTLAGLSLINRESIDAIRTAVWELEKAGYITRRQGR
DEKGKMTAIEYTIYEQPQPPTLDCPVLENPTADKPILENPTPDNPTSENPTQLNKELLKTNLPKKEKLNTDISNTHSIPF
HSLNPSPLEDAAQPPERKRKETTDAYRVYEEIIKDNIEYEHFIKHTDFEKERLDEIVSLILETVCTKRKTIRIAGDDYPA
ELVKAKFMKLNSSHIEFVFACMSENTTKIRNIKQYLKAVLFNAPNTIDSYYTALVNHDMYGGRTIQSARSKGIPDYTYNE
GESL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00685 YP_008394209.1 hypothetical protein Not tested Not named Protein 3e-106 70