Gene Information

Name : CD630_11160 (CD630_11160)
Accession : YP_001087605.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : conjugative transposon protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1312709 - 1313185 bp
Length : 477 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type h : extrachromosomal origin

DNA sequence :
ATGCAAGATGAAGTCAACGAAAAAGTTGTGTCTTTAGCAATCAAAACATCTAAGCTGACCGCCGAAGTGCTGCAAAAGGC
TATGAAAGCCCTGCTTGCCAAAGGCAAAGGGCAGCTAACCAAAGCCCCGCATGGAAAAATCACTATGCGGCAGCTTATGA
AGCCGGGAGAAAAGGTTTCCAACATTGAGATTACCGACCAGAATATCAAAGCCTTTGACCCTATCGCAAGGAAAAACGGG
CTTGATTACAACGTCAAGAAGATTGAGAACGGCAAGCCGCCGACCTACCTTGTGTCTTTTAGGGGCAAGGATATTGACGT
TATGACCGAAGCGTTCCGGGAATTTACCGCAAAGAAATTAGGCAGGAATAAAAAGCCCTCTATCCGCAAGCTGCTTTCCA
CTCTGAAAGACAAGGCGGCAGCTCTGAACGCACAGAGGGACAAAGTGAAGAAAAAGGACAGGGAGGTATCTCTATGA

Protein sequence :
MQDEVNEKVVSLAIKTSKLTAEVLQKAMKALLAKGKGQLTKAPHGKITMRQLMKPGEKVSNIEITDQNIKAFDPIARKNG
LDYNVKKIENGKPPTYLVSFRGKDIDVMTEAFREFTAKKLGRNKKPSIRKLLSTLKDKAAALNAQRDKVKKKDREVSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00687 YP_008394211.1 hypothetical protein Not tested Not named Protein 1e-29 49
EF2329 NP_815984.1 hypothetical protein Not tested Not named Protein 4e-18 41