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Name : CD630_11150 (CD630_11150) Accession : YP_001087604.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : conjugative transfer protein Tn1549-like, CTn4-Orf4 Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 1310925 - 1312712 bp Length : 1788 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 11976307, 12568329,12568327, 17650959,11157942, 11073898, 8863741; Product type pf : putative factor DNA sequence : ATGAAGCCGGAACTTAAAAAGCTGCTTATCCTAAATGCCCCCTATCTGCTCTTTGTCTATCTCTTTGATAAAGTCGGACA GGCGGTGCGGCTCTCTCCGGGGGCTGACCTTTCCGGCAAGGTGCTTTCCCTTGCAGACGGCTTTTCCGCTGCCTTTGCAA ACCCGCTTCCGAGTTTTTTTCCTGCCGATTTGCTTATCGGTATTGTGGGGGCTGTCCTTATCCGGCTTATGGTGTACTTC AAAGGCAAGAACGCGAAGAAATATCGAAAAGGCATAGAATACGGTTCTGCCCGTTGGGGCAACGCCGAAGATATAAAACC CTACACCGACCCGGTATTTCAAAATAATGTGCTGCTGACACAGACGGAACGGCTTACCATGAACAGCCGCCCGAAGCAGA CGAAGTATGCAAGGAATAAAAATATCCTTGTTATCGGGGGAAGCGGCAGCGGCAAGACAAGATTTTTTGTGAAGCCCAAC TTAATGCAAATGCACAGCAGCTACGTTGTAACCGACCCGAAAGGGACGGTTTTAGTCGAGTGCGGGAAGCTCTTACAGCG CGGCGGGTATCGGATAAAGGTGCTGAATACAATCAATTTCAAGAAATCCATGCGCTACAATCCCTTTGCCTATATCCGCA GCGAAAAAGACATTTTGAAACTGGTAAATACCTTGATTGCCAACACCAAAGGGGACGGGGAAAAAGCCGGGGAGGATTTT TGGGTAAAATCGGAACGGCTCTTTTACTGCGCCCTTATCGGCTACATTTGGTACGAAGCCCCGGAGGAAGAAAAGAACTT TACGACGCTGCTTGAAATGATAAATGCCAGTGAAGCCCGCGAGGACGACCCGGAATTTCAGTCCCCCGTTGACCTCATGT TTGAACGGTTGGAGGAAAAAGACCCGGAACACTTTGCCGTCCGGCAGTATAAGAAATTCTTGTTATCTGCGGGAAAAACA CGAAGCTCTATCCTCATTTCCTGCGGTGCGCGGCTTGCCCCTTTTGACATTAAGGAGCTGCGCGACCTTATGGAAACCGA CGAAATGGAGCTTGACACCATAGGCGACCGAAAGACTGCCCTGTTTGTTATCATTTCCGACACCGACGATACCTTTAACT TTGTCGTATCAATCCTTTACACGCAGCTTTTCAATCTGCTTTGCGACAAGGCAGATGATGAATACGGCGGCAGGCTGCCC GTCCATGTGCGCTGTCTGTTAGACGAGTTTGCGAATATCGGACAGATACCGAAGTTTGAAAAGCTCATAGCCACCATACG AAGCAGGGAAATCTCCGCGTCGATTATCTTACAGTCGCAAAGCCAGTTAAAGGCAATCTATAAGGACAACGCCGATACCA TAGTCGGCAACTGCGACACCACCCTTTTCTTGGGCGGCAAGGAGAAAACCACCCTCAAAGAAACGTCGGAAATCTTGGGG AAAGAAACCATTGACAGCTTCAACACTTCCGAGAACCGGGGGCGCGAGGTATCGCATGGGCTGAACTATCAGAAGTTAGG CAAGCAGCTTATGACGGAAGATGAAATAGCGGTTATGGACGGCGGGAAATGTATTTTACAGCTACGAGGGGTGCGCCCGT TCTTCTCTGATAAGTACGACATTACAAAGCACCCCAACTATAAATATCTTTCCGACTATGACAAGAAAAATACTTTTGAT ATGGAGAAGCATTTAAGGCGCAGACCCGCCCTTGTGAAGCCGGACGAAGTATTTGACTACTACGAAATCAGCGAAAGCGA TTTGCAGGAGGACACCGACCATGAATAG Protein sequence : MKPELKKLLILNAPYLLFVYLFDKVGQAVRLSPGADLSGKVLSLADGFSAAFANPLPSFFPADLLIGIVGAVLIRLMVYF KGKNAKKYRKGIEYGSARWGNAEDIKPYTDPVFQNNVLLTQTERLTMNSRPKQTKYARNKNILVIGGSGSGKTRFFVKPN LMQMHSSYVVTDPKGTVLVECGKLLQRGGYRIKVLNTINFKKSMRYNPFAYIRSEKDILKLVNTLIANTKGDGEKAGEDF WVKSERLFYCALIGYIWYEAPEEEKNFTTLLEMINASEAREDDPEFQSPVDLMFERLEEKDPEHFAVRQYKKFLLSAGKT RSSILISCGARLAPFDIKELRDLMETDEMELDTIGDRKTALFVIISDTDDTFNFVVSILYTQLFNLLCDKADDEYGGRLP VHVRCLLDEFANIGQIPKFEKLIATIRSREISASIILQSQSQLKAIYKDNADTIVGNCDTTLFLGGKEKTTLKETSEILG KETIDSFNTSENRGREVSHGLNYQKLGKQLMTEDEIAVMDGGKCILQLRGVRPFFSDKYDITKHPNYKYLSDYDKKNTFD MEKHLRRRPALVKPDEVFDYYEISESDLQEDTDHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00690 | YP_008394214.1 | TraG/TraD family protein | Not tested | Not named | Protein | 6e-155 | 77 |
| EF2328 | NP_815983.1 | TraG family protein | Not tested | Not named | Protein | 0.0 | 65 |
