Gene Information

Name : CD630_11120 (CD630_11120)
Accession : YP_001087601.1
Strain : Clostridium difficile 630
Genome accession: NC_009089
Putative virulence/resistance : Unknown
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1309464 - 1310333 bp
Length : 870 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12568329, 12568327,17650959, 11157942,11073898, 8863741; Product type pm : putative membrane component

DNA sequence :
ATGCAGAGCATACTTGACGCGATTAACGAATGGATAAAGGAAATCCTTATCGGAGCGATAAACGGTAATCTGTCAACTAT
GTTCGGGGACGTAAACGAAAAAGTCGGGACTATCGCAAACGAGGTAGGACAGACCCCGCAGGGTTGGAACGCAAACATTT
TCAGCATGATACAGACCCTTTCTGAAAATGTAATCGTCCCGATTGCGGGGCTTGTCATTACCTATGTCCTATGCTACGAG
CTAATCAGCATGGTAACGGAAAAGAACAATATGCACGACATAGAAACATTCATGTTCTTTAAGTGGATATTCAAAGCCTT
TGTCGCGGTGTTTATCGTAACCAACACGTTCAACATCACAATGGCAGTCTTTGATATGGCGCAGCATATCGTTTCCGGCG
CAGCGGGGGTTATCGGCGGCGATACGAATATCGACGTTGCCGAAGCCCTTGCCGCCATGCAGGAGGGGCTTGAAGATATG
GAAATCCCCGAACTGCTCTTACTTGTGCTTGAAACAAGCCTTGTGAGCCTTTGCATGAAAATCATGTCCGTACTGATAAC
CGTTATCCTCTACGGCAGAATGATAGAGATTTACCTTTACTGTTCGGTATCGCCTATTCCATTTGCAACCATGACTAACA
GAGAATGGGGACAGATTGGGAACAACTACCTAAAAGGGCTGTTCGCTCTTGGTTTTCAAGGCTTCCTCATTATGATATGT
GTCGGTATTTACGCTGTACTGGTAAACGATATGATAATCGCAGACAATCTGCACAGCGCGGTATTTTCCCTTGCCGCCTA
TACGGTTATCCTCTGTTTTTCCCTGTTCAAATCCGGCACACTGGCAAAATCCATATTCAACGCCCACTAA

Protein sequence :
MQSILDAINEWIKEILIGAINGNLSTMFGDVNEKVGTIANEVGQTPQGWNANIFSMIQTLSENVIVPIAGLVITYVLCYE
LISMVTEKNNMHDIETFMFFKWIFKAFVAVFIVTNTFNITMAVFDMAQHIVSGAAGVIGGDTNIDVAEALAAMQEGLEDM
EIPELLLLVLETSLVSLCMKIMSVLITVILYGRMIEIYLYCSVSPIPFATMTNREWGQIGNNYLKGLFALGFQGFLIMIC
VGIYAVLVNDMIIADNLHSAVFSLAAYTVILCFSLFKSGTLAKSIFNAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2324 NP_815979.1 hypothetical protein Not tested Not named Protein 6e-81 60
EFAU085_00714 YP_008394238.1 hypothetical protein Not tested Not named Protein 5e-71 54