|
Name : CD630_10970 (CD630_10970) Accession : YP_001087580.1 Strain : Clostridium difficile 630 Genome accession: NC_009089 Putative virulence/resistance : Unknown Product : ABC transporter multidrug-family ATP-binding protein Tn1549-like, CTn4-Orf28 Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : 3.6.3.- Position : 1289137 - 1290063 bp Length : 927 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 17135193, 11781802, 12568329, 12568327,17650959,11157942, 11073898, 8863741; Product type t : transporter DNA sequence : ATGGACAAAAATTATATCATTGAAACAAAAAATCTTACAAAGCAGTACGGCTCACAAAAGAGTGTCGCCGACTTAAATAT TCATGTGCAGAAAGGGAGAATTTACGGACTGCTTGGAAGAAACGGAGCCGGAAAAACGACCACTATGAAAATGCTACTTG GATTGACAAAGCCAACTTCCGGCGAAGTTAAAATATGGGGAAAGTCTTTGCAGGGGAATGAAAAGAAATTGTTGCCCCGT ATCGGTAGTCTGATTGAGTCGCCCGGTTTTTACCCTAATTTGACTGCTACGGAAAACTTACAAATTTTTGCTACCTTACG GGGCATACCCAACCGTCATTCAATTAAAAACACATTGGATTTGGTAGGATTGCCTTATAAAGACAAAAAACTGTTTTCCC AGTATTCTCTTGGTATGAAACAACGGCTTGCGATTGCACTTGCAGTTATGCACGACCCTGAACTTCTGATTTTAGATGAA CCTATCAATGGGCTTGACCCGATTGGAATTGCAGAAGTACGTTCTTTTATTCGCGAGCTTTGCGATACAAAGGGAAAAAC AATTTTAATTTCCAGTCATATCCTTTCGGAGATTTCTCTGCTAGCAGATGATATTGGAATTATCGACCATGGCACACTAT TGGAAGAAGAAAGTCTTGCGGAACTGGAACAAAAAAGCAGCAAACATATCCGATTTACTCTTTCTGATACCGCACAGGCA GCAAGAATTTTAGAGCGTACTTTCCATGAGAGCCATTTCTCTATACAGGACGACCATAATTTACGCTTGCATAATCTTGA TTTGTCCGTAGGAAAAATCGTGACTGCTTTTGTAGAAAACGGATTGGAGGTATCAGAAGCCCATACTTGTGAAGAAAGTC TTGAAGATTACTTCAAGCGTGTGACAGGAGGCGAAGGAATTGCTTAA Protein sequence : MDKNYIIETKNLTKQYGSQKSVADLNIHVQKGRIYGLLGRNGAGKTTTMKMLLGLTKPTSGEVKIWGKSLQGNEKKLLPR IGSLIESPGFYPNLTATENLQIFATLRGIPNRHSIKNTLDLVGLPYKDKKLFSQYSLGMKQRLAIALAVMHDPELLILDE PINGLDPIGIAEVRSFIRELCDTKGKTILISSHILSEISLLADDIGIIDHGTLLEEESLAELEQKSSKHIRFTLSDTAQA ARILERTFHESHFSIQDDHNLRLHNLDLSVGKIVTAFVENGLEVSEAHTCEESLEDYFKRVTGGEGIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cdd4 | CAA63569.1 | - | Not tested | PaLoc | Protein | 2e-34 | 43 |
