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Name : A1S_0616 (A1S_0616) Accession : YP_001083667.1 Strain : Acinetobacter baumannii ATCC 17978 Genome accession: NC_009085 Putative virulence/resistance : Virulence Product : secretion protein XcpR Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 667870 - 669072 bp Length : 1203 bp Strand : + Note : - DNA sequence : GTGCCTGAAACAGAAGACTTAATGGATCAAGAGGATGACGCGCCTATTGTTCGTCTAATCAATGCACTTCTCTCTGAGGC AATTCGTGTTGGAGCTTCAGATATCCATATTGAAGCCTTTGAGAAAAAGCTATCAGTTCGTTTACGGGTAGATGGTCAAT TACGTGAAATTGTGCAGCCACGCCGTGAACTAGCCCCGTTACTTGTTTCGCGTATTAAAGTTATGGCGAAACTCGATATT GCTGAAAAGCGTGTACCGCAAGATGGACGTATTTCTTTACGTCTTGCTGGTCGTGAAGTCGATGTCCGTGTTTCAACTTT GCCATCGTCACATGGTGAAAGGGTGGTCATGCGTTTACTCGATAAACAAGCGGGTCGCCTTAATATGACTCACCTAGGTT TAATGGCAAATGACTATGAACGTTTAACTCAGTTAGTACATCGTCCGCACGGTATTATTTTGGTCACAGGGCCTACTGGT TCGGGGAAAACGACGACTTTATATGCTGCCTTATCTGATCTAAATGACAATACCCGTAACATCTTAACCGCCGAAGATCC AATTGAGTATCAGCTTGAAGGTATTGGCCAAACTCAAGTGAATACCAAAGTGGATATGACATTTGCTCGTGCTTTAAAGG CAATGTTACGTCAAGATCCAGATGTGGTCATGGTGGGGGAGATTCGTGATCTGGAAACTGCTGAAATTGCGGTGCAGGCA TCCTTAACAGGTCATTTGGTTTTATCGACGCTACATACCAACACCGCTATTGGTGCAGTGACTCGACTTAAAGATATGGG GATTGAACCTTTCCTGCTTTCAAGTTCTTTAATTGGGGTGGTTGCGCAGCGTTTGGTTCGTACTTTATGTCCACATTGTA TGACATGGCGTGAAGCCGATACTTTTGAGAAGCAAGTTTTTCAGCATATTTCTCATGAACCAAGTTTAAAGTTACCAGAG GCTCAAGGGTGTGATCAGTGTTCTCATTTAGGGTTTAATGGCCGTACAGCGATTTATGAAATTGTACCTATTGATGAACC TATGCGCCGTCTCATTCATGGTAATGCAGCTGAATTTGAATTAGAAAACCATGCTCGTCAGTATTCTGGTTCTATTCGCG ATGATGGTTTACGTAAGGTGCTCTCAGGTAAAACTACACTTGAAGAAGTGCTTCGTGTAACCAATGAAGCAAGTGAAGCA TAA Protein sequence : MPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMAKLDI AEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQLVHRPHGIILVTGPTG SGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVMVGEIRDLETAEIAVQA SLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEKQVFQHISHEPSLKLPE AQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSGKTTLEEVLRVTNEASEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-126 | 67 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-126 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A1S_0616 | YP_001083667.1 | secretion protein XcpR | VFG0182 | Protein | 3e-131 | 70 |
| A1S_0616 | YP_001083667.1 | secretion protein XcpR | VFG2048 | Protein | 4e-126 | 67 |
| A1S_0616 | YP_001083667.1 | secretion protein XcpR | VFG1876 | Protein | 2e-122 | 62 |
| A1S_0616 | YP_001083667.1 | secretion protein XcpR | VFG0233 | Protein | 3e-87 | 49 |
| A1S_0616 | YP_001083667.1 | secretion protein XcpR | VFG2426 | Protein | 1e-76 | 48 |
