Gene Information

Name : A1S_0052 (A1S_0052)
Accession : YP_001083149.1
Strain : Acinetobacter baumannii ATCC 17978
Genome accession: NC_009085
Putative virulence/resistance : Virulence
Product : WecC protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 61385 - 62422 bp
Length : 1038 bp
Strand : +
Note : -

DNA sequence :
GTGGACCAAGTTAACCGACCAGATTTAACCCCTTTAAAAAAGGCAAGCGAGACAGTTGGTCAAGCTCTAAAAAAGGGCGA
TATTGTTGTTTATGAATCAACAGTATATCCAGGTGCTACAGAAGAAGTATGTATTCCAATATTGGAAAAAGTATCGGGAC
TTAAATTTAATCAGGACTTTTTTGCAGGATATAGTCCTGAGCGTATTAACCCAGGAGATAAGGTTAATACACTAACCAAA
ATTAAAAAAATTACGAGTGGTAGCACACCAGAAGTAGCTAATACGGTGGATGCAGTGTATGCCAGCATTATTACTGCAGG
TACTCATAAAGCTTCTAGTATTAAAGTCGCAGAAGCAGCAAAAGTTATTGAGAATACTCAGCGTGATTTAAATATTGCTT
TGGTTAATGAGTTATCGGTAATTTTTGACCGTATTGGTATTGATACCTTAGATGTGTTGGAAGCAGCGGGTAGTAAGTGG
AACTTTTTGCCTTTCCGTCCTGGTCTGGTAGGTGGACACTGTATCGGTGTTGACCCTTACTACTTGACCCATAAAGCAGA
AGAGGTAGGTTATCATCCGCAGGTAATTCTTGCTGGTCGTCGTATTAATGACAATATGGCGCGCTATGTTGCTCGTAATA
CGATTAAACTAATGCTTCAAAATGGTATTGATGTGCCACGCTCAAAAGTAGGGGTATTAGGGGTCACATTTAAAGAAAAC
TGTCCTGATATTCGTAATAGTAAAGTAGCCGATTTAATTAAAGAGCTTGAATTTTGGGGTGCACAGGTTGTGGTTGCAGA
CCCTTGGGCTGATGCAGAAGAAGTTAAGCATGAATATGGTGTTGAGCTTGGTACCGTGAATGCTCAAAATCCAGTTGATA
GCCTAATTGTCGCAGTAGGCCATAGTGAGTTCCGTTCTCTTTCTGCCAGTGAATTACGTAGCTACGTAAAAGCTGAAAAA
CCAGTTTTAGCTGATGTGAAGAGTCTTTTTGACCGTACACAGATGTCAGATGTTGGTTTTACTGTATTCCGTCTCTAA

Protein sequence :
MDQVNRPDLTPLKKASETVGQALKKGDIVVYESTVYPGATEEVCIPILEKVSGLKFNQDFFAGYSPERINPGDKVNTLTK
IKKITSGSTPEVANTVDAVYASIITAGTHKASSIKVAEAAKVIENTQRDLNIALVNELSVIFDRIGIDTLDVLEAAGSKW
NFLPFRPGLVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIKLMLQNGIDVPRSKVGVLGVTFKEN
CPDIRNSKVADLIKELEFWGAQVVVADPWADAEEVKHEYGVELGTVNAQNPVDSLIVAVGHSEFRSLSASELRSYVKAEK
PVLADVKSLFDRTQMSDVGFTVFRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-102 65
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-102 65
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-91 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1S_0052 YP_001083149.1 WecC protein VFG0431 Protein 2e-102 65