Gene Information

Name : A1S_2883 (A1S_2883)
Accession : YP_001085891.1
Strain : Acinetobacter baumannii ATCC 17978
Genome accession: NC_009085
Putative virulence/resistance : Virulence
Product : OmpR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3332338 - 3332937 bp
Length : 600 bp
Strand : -
Note : -

DNA sequence :
ATGTTTCATGATGGTCAGGATGCTTACACGAGCTTTCAACAACGTAAACCTAATTTAATGATTCTGGACTTAATGGTTCC
AAGAATGGATGGTTTAACGATTTGCCGTAAGGTACGTGAACAGTCAGATTTACCAATTATTATGGTGACAGCACGTACCG
AAGAAATTGATCGTGTCTTGGGCCTAAACATGGGGGCAGATGATTATGTGTGCAAACCTTTTAGTCCAAAAGAACTGGTT
GCTCGTGTACAGGCCGTTTTACGCCGTTTAGAACGTAAGGCTGAGCCAGAGCAAAATGATTCTTTCCGTATTGATAAGGC
ACAGCAAAGAATTTGGTATCAACAAAAATCTTTAAGTTTAACGCCAACAGAATTTCGCCTACTTGAGTTATTTTTAGAAC
ATGTGGGGCAAGTTTATTCACGTGCACAATTATTAGATCATATTAATCCGGACAGCTTTGATGTTGCCGACCGAGTTATT
GATAGCCATATTAAAAACTTGCGTCGAAAAATCACGGAAGTGGCCGAAACTGGTAACCGTCATGAGTGGATTCAAGCTGT
TTATGGAGTAGGTTATCGCTTCGAATATCCAGAAGAATAA

Protein sequence :
MFHDGQDAYTSFQQRKPNLMILDLMVPRMDGLTICRKVREQSDLPIIMVTARTEEIDRVLGLNMGADDYVCKPFSPKELV
ARVQAVLRRLERKAEPEQNDSFRIDKAQQRIWYQQKSLSLTPTEFRLLELFLEHVGQVYSRAQLLDHINPDSFDVADRVI
DSHIKNLRRKITEVAETGNRHEWIQAVYGVGYRFEYPEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-26 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_010400.5986590.p0 Protein 8e-93 100
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_010410.6002989.p0 Protein 6e-93 99
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_011595.7057856.p0 Protein 6e-93 99
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator CP000034.1.gene2186. Protein 5e-40 51
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_002695.1.916589.p Protein 3e-40 51
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator BAC0596 Protein 3e-40 51
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator BAC0039 Protein 5e-40 51
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator CP001138.1.gene2239. Protein 3e-40 51
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator CP004022.1.gene1676. Protein 4e-39 50
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator CP000647.1.gene2531. Protein 1e-39 49
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator CP001918.1.gene3444. Protein 3e-39 49
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_002952.2859905.p0 Protein 7e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_007793.3914279.p0 Protein 9e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_002745.1124361.p0 Protein 9e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_009782.5559369.p0 Protein 9e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_002951.3237708.p0 Protein 9e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_003923.1003749.p0 Protein 8e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_002758.1121668.p0 Protein 9e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_007622.3794472.p0 Protein 7e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_009641.5332272.p0 Protein 9e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_013450.8614421.p0 Protein 9e-33 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_007622.3794948.p0 Protein 9e-27 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator AE015929.1.gene1106. Protein 4e-22 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_003923.1003417.p0 Protein 9e-27 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_013450.8614146.p0 Protein 9e-27 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_002951.3238224.p0 Protein 9e-27 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_007793.3914065.p0 Protein 9e-27 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_002758.1121390.p0 Protein 9e-27 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_010079.5776364.p0 Protein 9e-27 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator NC_002952.2859858.p0 Protein 9e-27 41
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator CP000034.1.gene3671. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator VFG1563 Protein 5e-27 42
A1S_2883 YP_001085891.1 OmpR family transcriptional regulator VFG1702 Protein 1e-26 41