Gene Information

Name : A1S_0255 (A1S_0255)
Accession : YP_001083332.1
Strain : Acinetobacter baumannii ATCC 17978
Genome accession: NC_009085
Putative virulence/resistance : Resistance
Product : RND efflux transporter
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1538
EC number : -
Position : 281754 - 282944 bp
Length : 1191 bp
Strand : +
Note : -

DNA sequence : 
TTGGCAACAGGCGCTTTACTACCAACAGTCACATTATCTGGAAATATTACCCGTAATCGACAAACGGTAAAGCGTTCAAA
TTTTCCCGGTGTTGATCAGGAAGGACTTTCCGATGCTTTGGTAAGTAATACATCGACTACCAAACAGGCTACTTTATCTG
CCCGTCAGCCTCTTTTTCGTATGGATGCATGGGAAGGTTATAAACAGGTTAAAACTTCGGTTGCCCTTAGTGAAATTACT
TTAAAACTGCAAAAACAAGATCATGTTTTAAATGTAGCTGAAGCCTATTTTAATGTACTGCGTCAACAAGCACTTACCGC
TGCATATTTACAAGAAGAAAAAGCTTTGCTTGAACAGCTCAATATGATGAACGCCAAGCTTAAAGAAGGGTTGGTAGCAC
GTAGTGATGTGAGTGAAGCAAATGCCCAGTATCAAAATGCCAGAGCCAACCGTATTGCTACCAATGTGCAGCTTCTATTG
GCTCAAGAGCAACTATCTGAATATATTGGTCCTTATCAAGATAAGCTTGCTGTATTGAGAAGTGATTTTATCTTTCAAAA
ACCTTATCCGGCACAGCTCGATGAGTGGTTAGGATTAGCCCAACAGCAAAATTTAAAGATTCAACAAGCACGTTTACAAA
AGCGATATGCTGAAGATCAACGTCGTGTGGAAAAAGCTGCACTTTATCCACAGATAGATGCAGTGGCGAGTTATGGTTAT
ACCAAACAAACGCCCGAAACGCTGATTTCGACTGATGGGAAGTTTGATCAGGTCGGGGTAGAGATGAACTGGAACTTATT
TAATGGAGGCCGGACTCGAACTTCTATTAAAAAAGCCAGTGTGGAGTTAAATAAAGCGCAAGCCCAACTTGATGCAGCCA
TTCGCCGTGCCAATGTCGATGTGAAAAGTGCTTTTATGCAGGTAGATACCGACCGAGCAAAACTTGAAGCAAGAAAGGCG
GCAATGGACTCTTCAGCACTTGTTTCTCAAGCTTCAAAAGCAAGTTATAACGAAGGCTTAAAAAGTATGGTCGATGTTTT
ATTGGCGCAGCGTAATGCTTTTTCAGCAAAACAGGATTATCTTAATGCTCAGTATGACTATTTATTAAATGTATTACGTT
TAAAAGCGGCTGTAGGTCAGCTAGGAGAAAAAGATCTAGTTGAATTAAACAGCTGGTTAACGTATCAGTAA

Protein sequence : 
MATGALLPTVTLSGNITRNRQTVKRSNFPGVDQEGLSDALVSNTSTTKQATLSARQPLFRMDAWEGYKQVKTSVALSEIT
LKLQKQDHVLNVAEAYFNVLRQQALTAAYLQEEKALLEQLNMMNAKLKEGLVARSDVSEANAQYQNARANRIATNVQLLL
AQEQLSEYIGPYQDKLAVLRSDFIFQKPYPAQLDEWLGLAQQQNLKIQQARLQKRYAEDQRRVEKAALYPQIDAVASYGY
TKQTPETLISTDGKFDQVGVEMNWNLFNGGRTRTSIKKASVELNKAQAQLDAAIRRANVDVKSAFMQVDTDRAKLEARKA
AMDSSALVSQASKASYNEGLKSMVDVLLAQRNAFSAKQDYLNAQYDYLLNVLRLKAAVGQLGEKDLVELNSWLTYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00321 YP_008207786.1 Outer membrane protein Not tested AbaR25 Protein 1e-169 99
BJAB0868_00325 YP_008211651.1 Outer membrane protein Not tested AbaR26 Protein 1e-169 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1S_0255 YP_001083332.1 RND efflux transporter NC_011595.7058144.p0 Protein 4e-170 99
A1S_0255 YP_001083332.1 RND efflux transporter NC_010400.5987140.p0 Protein 2e-170 99
A1S_0255 YP_001083332.1 RND efflux transporter NC_010410.6003655.p0 Protein 2e-170 99