Gene Information

Name : A1S_1307 (A1S_1307)
Accession : YP_001084337.1
Strain : Acinetobacter baumannii ATCC 17978
Genome accession: NC_009085
Putative virulence/resistance : Virulence
Product : ClpA/B-type chaperone
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1533124 - 1535814 bp
Length : 2691 bp
Strand : +
Note : -

DNA sequence :
TTGAGAGTAATGATGAGTAGTTTAAAAATTTTAATTACAAAACTTTCTACAGCTGCACGCACCGCTTTAGAAAAATCTGC
TAATGCTTGTGTTCTTCAGCAAAACTACGAAATTGAAATTGAACATTTATTTTTAGAGTTACTTAATCAGCCTTTAGAAA
ACGATTTAAAAATTTTATTAAAAAAATATAAAATCTCAGCAGATGCTTTAGCAGATGATTTAAAAGAAACAATTTCTCAA
TTACCAAAAGGTAATACACGTACTCCAATTTTTGCTAAATCAATTGTTCGTTTATTTGAACAAGCTTGGTTATTGGCTTC
AGCAGAACAAAATCCTGTCATTCGTAGTGGTCATTTACTGGTTGCATTATTAACTGCACCTGACCTCTATCAAATTGCAA
CGAGAGCTTCGAGTTTATTTGATCTTTTCCCGATAGACTCAATGAAACATAAGTTTCTTGAAATTTGTGAAAAAAGTGTA
GAACAACAAGAAGAATCAAAAAAATCTTCACAAGCAGATGAATTAGAACAAGCCGCGACTCCAACTGCAAAAACTCAAAA
AACACCTGCTTTAGATCAATATACAATTAATTTAACTGAAAAAGCGAAGAATGGCGGGATTGACCCTGTTATTGGGCGTG
AATATGAAATTCGTTTGATGCTCGATATTTTAATGCGTAGACGTCAGAACAACCCAATTTTAACTGGTGAGCCAGGTGTA
GGTAAAACAGCTGTAGTTGAAGGGTTGGCTTTAAAAATTGCTCAAGGTTTAGTTCCTGAAGCATTAAAAAATGTTCATTT
GCACGTTTTAGATATGGGACTTTTGCAAGCTGGGGCAAGTGTTAAAGGTGAATTTGAAAACCGTTTAAAGCAAGTTATTC
AAGAAGTCCAATCATCGGCTCATCCTATTATTTTATTTATTGATGAAGCACATACGCTTATTGGAGCTGGTGGCCAAGCG
GGGCAAAACGATGCTGCCAATCTTTTAAAACCTGCACTTGCACGTGGCGAGTTACGTACTATTGCTGCAACGACATGGGC
AGAATATAAACAGTATTTTGAGAAAGATGCTGCATTGAGCCGCCGTTTTCAGGTGGTAAAGGTTGAAGAACCGACCGAAG
AAGTTGCTGTAGATATGTTACGTGCAATGATTCCCGTAATGCAAAAGCACTTTAATTTACAAATTGATGATGAAGCAATT
GTAACGGCTGTACATGCCTCTCATCGCTATATTAGTGGTCGTCAACTCCCAGACAAAGCAGTAAGTGTTCTTGATACTGC
GGCAGCGCGTGTAGCTTTGACCCAAAATGCACAGCCAGTCAAACTTGATCAATTAAAAGCACAAGAACATAACTTAAAGC
TTGAGCAACAAATTTTGGAAAATGAACACCGTCAAATTCCAATACATCATGAAAGATTAGAAAATCTGAAAAACCAACTA
GAGTCATTACAAAGTGAGATCCAAGAGACTCAGGAACAATGGCAAAAAGAATTAGAGCTAGTTCGTAAAATTCAGGAATT
AGAAGCGCAGAGCCATTCTAATGAGTCTGAAGCCTACGATCAGATTAATTTAATACGCAAAGACCTTGCTGATATTCAGG
GACAACAGCCGTTAGTTTTTGAGCGAGTAAACTCTCAGATCATCAATGAAATTATTTCTGATTGGACAGGTATTCCTGTT
GGGAAAATGGTCAATGATGAAATTAAGCAGATTTTAACGCTTGAAGATAAATTAGGTGAGCGTGTAATGGGGCAAGATTA
TGCACTTACACAATTAGTTCAAGGGATTAAAACTTCAAAAGCTAAATTAGAAGATCCAAATAAACCTCAAGGGGTGTTCC
TTTTAGTCGGGCCTAGTGGGGTTGGTAAAACTGAAACTGCTTTAGCCTTAGCTAATGAGTTATATGGCGGTGAACAGCAT
TTAATCACGATTAATATGTCTGAGTATCAAGAAGCACATACTGTCTCTTCGCTTAAAGGTGCTCCTCCAGGCTATGTTGG
CTATGGTCAGGGTGGGGTTTTAACTGAAGCTGTACGCCGTAATCCTTATAGTGTTGTGTTACTTGACGAAATTGAAAAAG
CACATAGCGATGTTCAGGAGTTGTTCTATCAAGTATTTGATAAAGGCACTTTAGAGGATGGTGAAGGGCGCGTTATTGAT
TTTAAAAACACGACAATCTTATTAACTTCAAATACAGGCTCGAGTGCAATTATGCAGGCATGTTTAAATCAGCCTGTAGA
AAAATGGCCTACCGCAGAAGATTTAATCGAACATTTAAAGCCGAGTTTATATAAACAGTTTAAGCCAGCCTTCTTAGGGC
GCATGAGAGTTGTGCCATATTTCCCATTGCATGATGATTTATTGGTTCGAATTATTAAACATAAATTGGGCAAAATTACT
GCTCGAATTGAAAAACAATATGGAACGGAAGTTCAATATTCAGATGACTTGGTTGAATTGCTACTCAGCCGTTGTACTGA
AGTGGATAGTGGCGCCCGTAATGTTGATAACATCTTAAATTCTACAGTTTTACCTGCTTTGGCAACTGAAATTTTAGTGG
CGTTGGCAGATCAAAAATTGCCGAAATTGATCATGATTGATGCAAAAGATGACGAGATCCAATATTTACTAGATCCTGTG
GCGAAGCCTGCTAAAAAACGGACTAGTAAAAAGTTGAAATCAGAAGTTTAA

Protein sequence :
MRVMMSSLKILITKLSTAARTALEKSANACVLQQNYEIEIEHLFLELLNQPLENDLKILLKKYKISADALADDLKETISQ
LPKGNTRTPIFAKSIVRLFEQAWLLASAEQNPVIRSGHLLVALLTAPDLYQIATRASSLFDLFPIDSMKHKFLEICEKSV
EQQEESKKSSQADELEQAATPTAKTQKTPALDQYTINLTEKAKNGGIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGV
GKTAVVEGLALKIAQGLVPEALKNVHLHVLDMGLLQAGASVKGEFENRLKQVIQEVQSSAHPIILFIDEAHTLIGAGGQA
GQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVKVEEPTEEVAVDMLRAMIPVMQKHFNLQIDDEAI
VTAVHASHRYISGRQLPDKAVSVLDTAAARVALTQNAQPVKLDQLKAQEHNLKLEQQILENEHRQIPIHHERLENLKNQL
ESLQSEIQETQEQWQKELELVRKIQELEAQSHSNESEAYDQINLIRKDLADIQGQQPLVFERVNSQIINEIISDWTGIPV
GKMVNDEIKQILTLEDKLGERVMGQDYALTQLVQGIKTSKAKLEDPNKPQGVFLLVGPSGVGKTETALALANELYGGEQH
LITINMSEYQEAHTVSSLKGAPPGYVGYGQGGVLTEAVRRNPYSVVLLDEIEKAHSDVQELFYQVFDKGTLEDGEGRVID
FKNTTILLTSNTGSSAIMQACLNQPVEKWPTAEDLIEHLKPSLYKQFKPAFLGRMRVVPYFPLHDDLLVRIIKHKLGKIT
ARIEKQYGTEVQYSDDLVELLLSRCTEVDSGARNVDNILNSTVLPALATEILVALADQKLPKLIMIDAKDDEIQYLLDPV
AKPAKKRTSKKLKSEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-160 48
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-126 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-126 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A1S_1307 YP_001084337.1 ClpA/B-type chaperone VFG2076 Protein 1e-163 47
A1S_1307 YP_001084337.1 ClpA/B-type chaperone VFG2084 Protein 1e-143 46