|
Name : ureC (A1S_1014) Accession : YP_001084048.2 Strain : Acinetobacter baumannii ATCC 17978 Genome accession: NC_009085 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 1172750 - 1174450 bp Length : 1701 bp Strand : + Note : ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alp DNA sequence : ATGAAAATGTCACGTCGTGCATACGCAGAAATGTTTGGTCCAACGGTTGGTGATCGTATTCGTTTGGCTGACACAGCGCT TTTTATTGAAGTTGAGCAAGACTTAACGACATATGGTGAAGAAGTTAAATTTGGTGGCGGAAAAGTTATTCGTGACGGGA TGGGACAATCTCAGCTTCTAGCTGATGAAGTTGCCGATACAGTCATAACCAATGCTTTAATTGTAGATTGGTGGGGAATT GTTAAAGCCGATGTGGGCTTAAAGAATGGACGAATCTGGAAAATAGGGAAAGCTGGAAACCCTGATATTCAACCCGACAT TACTATTCCTTTAGGTGCAGCGACAGAAGTAATTGCAGGTGAAGGACAAATTTTAACAGCTGGTGGTATTGATACTCACA TTCACTGGATCTGTCCTCAGCAAGTTGAAACCGCGCTGATGTCTGGGACAACGACAATGGTGGGTGGTGGGACAGGACCA GCAGCAGGTACTTCGGCAACGACAGTGACTCCAGGGCCTTGGCATATAGCGACCATGTTGCAGGCGATTGATGATTTGCC TATGAATATTGGCTTGTTAGGTAAAGGGAATTTAAGTTTACCTGACCCCATTCGCGAGCAAATTAAAGCAGGAGTAATTG GGTTAAAACTACACGAAGATTGGGGTTCAACACCTGCGGCTATTGATAACTGTTTGAGCGTTGCAGATGAGTATGATGTA CAGGTCGCAATTCATACGGATACATTGAATGAAGGTGGTTTTTTAGAAGAAACGCTAGCGGCATTTAAAGACCGTACGAT TCATACGTACCATACCGAAGGTGCGGGCGGCGGGCATGCTCCCGATATTTTAAAAGCAATTGGGCAAAGTAATGTCTTGC CATCTTCGACCAACCCAACACGACCTTATACGATCAATACCATTGATGAGCATTTAGATATGCTCATGGTTTGCCATCAT TTAGACCCTGCAATTGCTGAAGATATTGCTTTTGCAGAAAGTCGTATTCGCCGTGAAACCATTGCTGCTGAAGATATTTT ACAAGACTTAGGCGCAATTGCCATGATGTCATCTGATTCTCAGGCAATGGGACGTGTGGGTGAAGTGATTTTACGAACTT GGCAAACTGCCCACAAAATGAAAGTACAACGTGGCCCATTAGAGGGTGACAATGAGTTTCATGATAACAATCGCGTTAAA CGCTACATTGCCAAATATACAATTAACCCGGCAATTACCCATGGTTTAAGTCATGAAATTGGTTCGGTTGAAGTCGGAAA ACTTGCTGATCTGGTGTTATGGAAGCCAGCCTTTTTTGGTGTGAAACCTTCCATGATTATTAAAGGTGGCATGATTGCAG CGGCACCTATGGGTGACATTAATGCTTCAATTCCTACACCTCAACCAGTGCATTATCGCCCAATGTTTGGGGCTTATCCG CGTGGTGTACATAACACCTGTATTACCTTTTTATCTCAAGTCGCAATTGATGAAAAAGTTGCTGAGAAGCTAAACCTTAA AAAGTTAATCAGTCCCTGTAAAAACACGCGTTCAATTACCAAAGCCGATATGAAACATAATACATATTGTCCTGTTATGC AGGTTCATCCTGAGACTTACGAGGTGCGGGCCGATGGTGAATTACTAACGTGTGAACCTGCTGACGTATTACCGATGGCA CAACGTTATTTCTTGTTTTAA Protein sequence : MKMSRRAYAEMFGPTVGDRIRLADTALFIEVEQDLTTYGEEVKFGGGKVIRDGMGQSQLLADEVADTVITNALIVDWWGI VKADVGLKNGRIWKIGKAGNPDIQPDITIPLGAATEVIAGEGQILTAGGIDTHIHWICPQQVETALMSGTTTMVGGGTGP AAGTSATTVTPGPWHIATMLQAIDDLPMNIGLLGKGNLSLPDPIREQIKAGVIGLKLHEDWGSTPAAIDNCLSVADEYDV QVAIHTDTLNEGGFLEETLAAFKDRTIHTYHTEGAGGGHAPDILKAIGQSNVLPSSTNPTRPYTINTIDEHLDMLMVCHH LDPAIAEDIAFAESRIRRETIAAEDILQDLGAIAMMSSDSQAMGRVGEVILRTWQTAHKMKVQRGPLEGDNEFHDNNRVK RYIAKYTINPAITHGLSHEIGSVEVGKLADLVLWKPAFFGVKPSMIIKGGMIAAAPMGDINASIPTPQPVHYRPMFGAYP RGVHNTCITFLSQVAIDEKVAEKLNLKKLISPCKNTRSITKADMKHNTYCPVMQVHPETYEVRADGELLTCEPADVLPMA QRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 0.0 | 73 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 0.0 | 73 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 8e-168 | 65 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 8e-168 | 65 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 8e-168 | 65 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 8e-168 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_001084048.2 | urease subunit alpha | VFG0270 | Protein | 3e-145 | 60 |
