Gene Information

Name : glcE (BMA10247_2600)
Accession : YP_001082126.1
Strain :
Genome accession: NC_009080
Putative virulence/resistance : Unknown
Product : glycolate oxidase FAD binding subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 2570136 - 2571224 bp
Length : 1089 bp
Strand : -
Note : identified by match to protein family HMM PF01565

DNA sequence :
ATGGAAGAGGACGACATCGTCGCAGGCTGGGCCGCGCGCATCCGCGACGCCGCGGCGAGCGGCCGCGCGCTGCGCATACG
CGGCGGCGGCACGAAGGACTGGTACGGCCAGGCGCTCGACGGGGAAATCCTCGATACGCGCGCGCATCACGGCATCGTGT
CGTACGACCCGGCCGAACTCGTCGTCACCGCGCGCGCGGGCACGTCGCTCGCCGAGCTCGAGGCGACGCTCGCCGAGCGC
GGCCAGATGCTGCCGTTCGAGCCGCCGCATTTCGGGCGCGGCGCGACGCTCGGCGGCGCGGTGGCGGCGGGCCTCGCCGG
CCCGCGCCGCGCGACGACGGGCGCGCCGCGAGATTTCGTGCTCGGCGTGGCGATCCTGAACGGGCGCGGCGACAGGCTGC
GCTTCGGCGGGCAGGTCGTGAAGAACGTCGCGGGCTACGACGTGTCGCGGCTGATGGCGGGCTCGCTCGGCACGCTCGGG
CTGATGCTCGAGCTGTCGGTCAAGGTGTTGCCCGTCCCCGCCGCCGAGCTCACGCTGAAGTTCGACATGAGCGCGACCGA
CGCGGTGCGCAAGCTCAACGAATGGGCGGGCCGTCCGTTTCCGCTGTCCGCGAGCGCGTGGCGCTACGGCACGCTCGTGC
TGCGCCTGTCGGGCGCGGAGGCGGCCGTGAAAAGCGCGAAGACCGTGCTCGGCGGCGAAGCCGTCGACGCGGTCGAGGCC
GAGCGCTTCTGGGAAGGCGTGCGCGAGCAGAACGACCCGTTCTTCTCGTCGCTCGCGCCGGGCCATGCGCTGTGGCGGCT
GTCGCTGCCGTCGATCACCGAGCCGATGCACCTGCCCGGCACGCAGATGATGGAATGGGGCGGCGCGCAACGCTGGTGGA
TCACCGACGCCGACGCGCAGACGGTGCGCATGAGCGCGAAACAGGCGGGCGGCCACGCGACGCTCTTTCGCGCGAGCGAA
AGCTACGACAGGAGCGCGGGCGTGTTCACGCCGCTGCCCGCGCCGCTGATGAAAATCCACCGCGGCCTGAAGACGGCGTT
CGATCCGGCGCGCATCTTCAACCGCGGCCGGCTCTACCCCGATCTCTAA

Protein sequence :
MEEDDIVAGWAARIRDAAASGRALRIRGGGTKDWYGQALDGEILDTRAHHGIVSYDPAELVVTARAGTSLAELEATLAER
GQMLPFEPPHFGRGATLGGAVAAGLAGPRRATTGAPRDFVLGVAILNGRGDRLRFGGQVVKNVAGYDVSRLMAGSLGTLG
LMLELSVKVLPVPAAELTLKFDMSATDAVRKLNEWAGRPFPLSASAWRYGTLVLRLSGAEAAVKSAKTVLGGEAVDAVEA
ERFWEGVREQNDPFFSSLAPGHALWRLSLPSITEPMHLPGTQMMEWGGAQRWWITDADAQTVRMSAKQAGGHATLFRASE
SYDRSAGVFTPLPAPLMKIHRGLKTAFDPARIFNRGRLYPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 6e-67 51